Protein–RNA interactions for Protein: A2VEC9

SSPO, SCO-spondin, humanhuman

Predictions only

Length 5,147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSPOA2VEC9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSPOA2VEC9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC12.09□□□□□ -0.47
SSPOA2VEC9 AC108673.1-201ENST00000510422 1159 ntBASIC12.09□□□□□ -0.47
SSPOA2VEC9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC12.08□□□□□ -0.47
SSPOA2VEC9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SSPOA2VEC9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSPOA2VEC9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSPOA2VEC9 AC004987.1-201ENST00000428627 508 ntBASIC12.08□□□□□ -0.48
SSPOA2VEC9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SSPOA2VEC9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC12.08□□□□□ -0.48
SSPOA2VEC9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSPOA2VEC9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSPOA2VEC9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SSPOA2VEC9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC12.07□□□□□ -0.48
SSPOA2VEC9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SSPOA2VEC9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSPOA2VEC9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSPOA2VEC9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC12.07□□□□□ -0.48
SSPOA2VEC9 WASH5P-204ENST00000632292 975 ntBASIC12.07□□□□□ -0.48
SSPOA2VEC9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC12.06□□□□□ -0.48
SSPOA2VEC9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC12.06□□□□□ -0.48
SSPOA2VEC9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSPOA2VEC9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSPOA2VEC9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC12.06□□□□□ -0.48
SSPOA2VEC9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC12.05□□□□□ -0.48
SSPOA2VEC9 U85056.1-201ENST00000616429 682 ntBASIC12.05□□□□□ -0.48
SSPOA2VEC9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC12.05□□□□□ -0.48
SSPOA2VEC9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSPOA2VEC9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC12.04□□□□□ -0.48
SSPOA2VEC9 TSPY13P-201ENST00000338964 914 ntBASIC12.04□□□□□ -0.48
SSPOA2VEC9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC12.03□□□□□ -0.48
SSPOA2VEC9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSPOA2VEC9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
SSPOA2VEC9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
SSPOA2VEC9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC12.02□□□□□ -0.49
SSPOA2VEC9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC12.02□□□□□ -0.49
SSPOA2VEC9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSPOA2VEC9 ATP5G2P3-201ENST00000429083 425 ntBASIC12.02□□□□□ -0.49
SSPOA2VEC9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC12.01□□□□□ -0.49
SSPOA2VEC9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC12.01□□□□□ -0.49
SSPOA2VEC9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSPOA2VEC9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSPOA2VEC9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSPOA2VEC9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSPOA2VEC9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC12□□□□□ -0.49
SSPOA2VEC9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
SSPOA2VEC9 HES4-204ENST00000484667 667 ntTSL 3 BASIC12□□□□□ -0.49
SSPOA2VEC9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SSPOA2VEC9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SSPOA2VEC9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC12□□□□□ -0.49
SSPOA2VEC9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC12□□□□□ -0.49
SSPOA2VEC9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SSPOA2VEC9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SSPOA2VEC9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC11.99□□□□□ -0.49
SSPOA2VEC9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SSPOA2VEC9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC11.99□□□□□ -0.49
SSPOA2VEC9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC11.99□□□□□ -0.49
SSPOA2VEC9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SSPOA2VEC9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SSPOA2VEC9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSPOA2VEC9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSPOA2VEC9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC11.97□□□□□ -0.49
SSPOA2VEC9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SSPOA2VEC9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC11.96□□□□□ -0.49
SSPOA2VEC9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SSPOA2VEC9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SSPOA2VEC9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SSPOA2VEC9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
SSPOA2VEC9 CHML-204ENST00000638121 920 ntTSL 2 BASIC11.96□□□□□ -0.5
SSPOA2VEC9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSPOA2VEC9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC11.95□□□□□ -0.5
SSPOA2VEC9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC11.95□□□□□ -0.5
SSPOA2VEC9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC11.95□□□□□ -0.5
SSPOA2VEC9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSPOA2VEC9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSPOA2VEC9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSPOA2VEC9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSPOA2VEC9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSPOA2VEC9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSPOA2VEC9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC11.93□□□□□ -0.5
SSPOA2VEC9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSPOA2VEC9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC11.93□□□□□ -0.5
SSPOA2VEC9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSPOA2VEC9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSPOA2VEC9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC11.93□□□□□ -0.5
SSPOA2VEC9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC11.92□□□□□ -0.5
SSPOA2VEC9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSPOA2VEC9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SSPOA2VEC9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSPOA2VEC9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC11.92□□□□□ -0.5
SSPOA2VEC9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC11.92□□□□□ -0.5
SSPOA2VEC9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSPOA2VEC9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SSPOA2VEC9 THA1P-201ENST00000590384 1145 ntBASIC11.91□□□□□ -0.5
SSPOA2VEC9 KRT18P60-201ENST00000312876 1297 ntBASIC11.91□□□□□ -0.5
SSPOA2VEC9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC11.91□□□□□ -0.5
SSPOA2VEC9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSPOA2VEC9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSPOA2VEC9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSPOA2VEC9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms