Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 IL4-202ENST00000350025 414 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 CH17-340M24.3-201ENST00000360656 598 ntTSL 2 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 MIR219A1-201ENST00000362166 110 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 RNA5SP69-201ENST00000364477 117 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 S100A8-201ENST00000368732 495 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 TMEM254-203ENST00000372275 860 ntTSL 2 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AGR2-201ENST00000401412 782 ntTSL 2 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC008060.3-201ENST00000419225 534 ntTSL 4 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 PDGFC-202ENST00000422544 849 ntTSL 5 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AL157895.1-203ENST00000423551 708 ntTSL 5 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 OR52J2P-201ENST00000427973 939 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 CDC42-IT1-201ENST00000431803 692 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 BX470209.2-201ENST00000442086 928 ntTSL 3 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 ATP6V1G1P3-201ENST00000442568 280 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 AL512353.1-203ENST00000444563 610 ntTSL 2 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AL591806.1-201ENST00000447167 1109 ntTSL 3 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 MRPS25-205ENST00000449354 1119 ntTSL 2 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AL592043.2-201ENST00000454146 743 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 DCD-202ENST00000456047 670 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 ATXN7L1-208ENST00000478915 1115 ntTSL 3 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 PGAM1P9-201ENST00000503887 755 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 IGLV1-41-201ENST00000519790 406 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 AP002802.1-201ENST00000526154 342 ntTSL 3 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 GLTPP1-201ENST00000528859 622 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AMN1-207ENST00000536761 1025 ntTSL 2 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC087321.1-201ENST00000539105 460 ntTSL 3 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC007406.2-201ENST00000540868 503 ntTSL 5 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AMN1-212ENST00000542781 879 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC073651.2-201ENST00000544148 660 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC048337.1-201ENST00000557474 552 ntTSL 4 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 HERC2P5-201ENST00000562687 3825 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 FAM95B1-204ENST00000586273 798 ntTSL 5 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 FAM95B1-207ENST00000589112 768 ntTSL 5 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 OR7D1P-201ENST00000592739 933 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 OR7A3P-201ENST00000595284 907 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC078802.1-201ENST00000602879 843 ntTSL 4 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC104958.2-201ENST00000605955 1141 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 AL844908.1-201ENST00000609953 652 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC107308.1-201ENST00000615897 301 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 RN7SL673P-201ENST00000616262 237 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 RN7SL495P-201ENST00000616925 237 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 AL391987.5-201ENST00000618472 412 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 RN7SL719P-201ENST00000620196 237 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 RN7SL469P-201ENST00000621501 237 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC011840.6-201ENST00000624536 610 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 AL357143.2-201ENST00000640266 421 ntBASIC8.09□□□□□ -1.11
SNX18Q96RF0 IFT122-201ENST00000296266 4151 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AL590491.1-201ENST00000611916 1988 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC8.09□□□□□ -1.11
SNX18Q96RF0 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 LIPC-203ENST00000414170 2968 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 MED7-201ENST00000286317 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNX18Q96RF0 AC079062.1-201ENST00000584544 1396 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
SNX18Q96RF0 TGFB2-OT1-201ENST00000625474 1371 ntBASIC8.09□□□□□ -1.12
SNX18Q96RF0 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
SNX18Q96RF0 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.09□□□□□ -1.12
SNX18Q96RF0 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
SNX18Q96RF0 SCNN1B-208ENST00000568923 1852 ntTSL 3 BASIC8.09□□□□□ -1.12
SNX18Q96RF0 LINC02525-202ENST00000435043 1505 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 AC002464.1-201ENST00000569685 1530 ntBASIC8.08□□□□□ -1.12
SNX18Q96RF0 CCR3-201ENST00000357422 2000 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 AL512310.11-201ENST00000611741 1837 ntTSL 5 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 ZNF702P-201ENST00000270443 2990 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 KIAA1524-201ENST00000295746 4075 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 FMO8P-201ENST00000434461 1600 ntBASIC8.08□□□□□ -1.12
SNX18Q96RF0 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNX18Q96RF0 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 SNORA7.3-201ENST00000384186 139 ntBASIC8.08□□□□□ -1.12
SNX18Q96RF0 TRBV3-1-201ENST00000390387 391 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 CEBPZOS-201ENST00000392061 695 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 MIATNB-201ENST00000417083 706 ntTSL 3 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 AC092100.1-203ENST00000421513 653 ntTSL 3 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 AC114982.2-201ENST00000461396 358 ntBASIC8.08□□□□□ -1.12
SNX18Q96RF0 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 APOA2-203ENST00000463812 401 ntTSL 2 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 RN7SL566P-201ENST00000467650 296 ntBASIC8.08□□□□□ -1.12
SNX18Q96RF0 PDPN-204ENST00000475043 849 ntTSL 3 BASIC8.08□□□□□ -1.12
SNX18Q96RF0 RNF7P1-201ENST00000478598 342 ntBASIC8.08□□□□□ -1.12
SNX18Q96RF0 LINC00900-202ENST00000501294 982 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms