Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RPL17P10-201ENST00000416091 555 ntBASIC9.39□□□□□ -0.91
MTHFRP42898 LINC00316-201ENST00000416722 455 ntTSL 2 BASIC9.39□□□□□ -0.91
MTHFRP42898 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 ARHGEF7-IT1-201ENST00000423329 804 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 PPP1R2P2-201ENST00000440405 613 ntBASIC9.39□□□□□ -0.91
MTHFRP42898 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC9.39□□□□□ -0.91
MTHFRP42898 BX470209.2-201ENST00000442086 928 ntTSL 3 BASIC9.39□□□□□ -0.91
MTHFRP42898 AL391883.1-201ENST00000454736 447 ntTSL 2 BASIC9.39□□□□□ -0.91
MTHFRP42898 GAPDHP28-201ENST00000455134 1003 ntBASIC9.39□□□□□ -0.91
MTHFRP42898 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 RPL10AP3-201ENST00000462503 651 ntBASIC9.39□□□□□ -0.91
MTHFRP42898 ZFAT-AS1-201ENST00000505776 939 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 SNCA-211ENST00000508895 905 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
MTHFRP42898 AC109588.1-202ENST00000515720 880 ntTSL 3 BASIC9.39□□□□□ -0.91
MTHFRP42898 MBP-228ENST00000527041 582 ntTSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 TBC1D21-202ENST00000535547 1005 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 NTAN1P3-201ENST00000535885 715 ntBASIC9.39□□□□□ -0.91
MTHFRP42898 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 CDH13-207ENST00000565636 810 ntTSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 AC004706.2-201ENST00000576277 294 ntBASIC9.39□□□□□ -0.91
MTHFRP42898 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC9.39□□□□□ -0.91
MTHFRP42898 RN7SL664P-201ENST00000584239 305 ntBASIC9.39□□□□□ -0.91
MTHFRP42898 AC005495.1-201ENST00000586611 1211 ntBASIC9.39□□□□□ -0.91
MTHFRP42898 AC090213.1-201ENST00000586841 546 ntTSL 4 BASIC9.39□□□□□ -0.91
MTHFRP42898 SNCA-212ENST00000611107 297 ntTSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 AC103691.1-201ENST00000619654 520 ntBASIC9.39□□□□□ -0.91
MTHFRP42898 AL109614.1-201ENST00000620327 419 ntBASIC9.39□□□□□ -0.91
MTHFRP42898 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
MTHFRP42898 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 AL662907.2-201ENST00000624339 3448 ntBASIC9.39□□□□□ -0.91
MTHFRP42898 LINC01555-201ENST00000370624 2884 ntTSL 2 BASIC9.39□□□□□ -0.91
MTHFRP42898 RCAN1-205ENST00000443408 2315 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 NF1P9-201ENST00000629326 2008 ntBASIC9.39□□□□□ -0.91
MTHFRP42898 ZNF234-204ENST00000592437 2292 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 OPTN-205ENST00000378757 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 EFHC1-213ENST00000635996 2548 ntTSL 5 BASIC9.39□□□□□ -0.91
MTHFRP42898 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 C8orf46-201ENST00000305454 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 LINC01304-204ENST00000454455 2454 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
MTHFRP42898 RUBCNL-206ENST00000409879 2997 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
MTHFRP42898 C5orf66-205ENST00000555438 3246 ntTSL 3 BASIC9.39□□□□□ -0.91
MTHFRP42898 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC9.38□□□□□ -0.91
MTHFRP42898 AC010997.6-201ENST00000623230 1645 ntBASIC9.38□□□□□ -0.91
MTHFRP42898 SPATA13-204ENST00000399949 3026 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
MTHFRP42898 FBXL2-222ENST00000538892 2793 ntTSL 5 BASIC9.38□□□□□ -0.91
MTHFRP42898 COL6A3-204ENST00000392003 3464 ntTSL 2 BASIC9.38□□□□□ -0.91
MTHFRP42898 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 MCTP1-202ENST00000429576 3159 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
MTHFRP42898 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC9.38□□□□□ -0.91
MTHFRP42898 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC9.38□□□□□ -0.91
MTHFRP42898 CRYGS-202ENST00000392499 1132 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
MTHFRP42898 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC9.38□□□□□ -0.91
MTHFRP42898 AC245452.3-201ENST00000413294 162 ntBASIC9.38□□□□□ -0.91
MTHFRP42898 RMDN2-AS1-201ENST00000414365 859 ntTSL 4 BASIC9.38□□□□□ -0.91
MTHFRP42898 SAA2-202ENST00000414546 1022 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 AC018641.1-201ENST00000435950 796 ntBASIC9.38□□□□□ -0.91
MTHFRP42898 RPS13P2-201ENST00000437890 455 ntBASIC9.38□□□□□ -0.91
MTHFRP42898 AL513318.1-201ENST00000437925 991 ntBASIC9.38□□□□□ -0.91
MTHFRP42898 AL035417.1-201ENST00000442754 214 ntBASIC9.38□□□□□ -0.91
MTHFRP42898 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC9.38□□□□□ -0.91
MTHFRP42898 AC004448.4-203ENST00000456537 441 ntTSL 3 BASIC9.38□□□□□ -0.91
MTHFRP42898 ELL2P2-201ENST00000515135 694 ntBASIC9.38□□□□□ -0.91
MTHFRP42898 SAA1-203ENST00000532858 583 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 AC002375.1-201ENST00000551161 581 ntTSL 3 BASIC9.38□□□□□ -0.91
MTHFRP42898 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC9.38□□□□□ -0.91
MTHFRP42898 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC9.38□□□□□ -0.91
MTHFRP42898 AC008734.2-201ENST00000595277 477 ntBASIC9.38□□□□□ -0.91
MTHFRP42898 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC9.38□□□□□ -0.91
MTHFRP42898 AC025518.2-201ENST00000605229 492 ntBASIC9.38□□□□□ -0.91
MTHFRP42898 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC9.38□□□□□ -0.91
MTHFRP42898 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC9.38□□□□□ -0.91
MTHFRP42898 WDR36-204ENST00000513710 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 IL24-201ENST00000294984 1701 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 GFM2-202ENST00000345239 2856 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 AC007238.1-201ENST00000434096 1741 ntBASIC9.38□□□□□ -0.91
MTHFRP42898 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 LINC00598-213ENST00000637438 1456 ntTSL 5 BASIC9.38□□□□□ -0.91
MTHFRP42898 GFM2-207ENST00000509430 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 CD200-201ENST00000315711 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 GALC-203ENST00000393569 2547 ntTSL 2 BASIC9.38□□□□□ -0.91
MTHFRP42898 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC9.38□□□□□ -0.91
MTHFRP42898 AC008033.3-201ENST00000612531 1407 ntBASIC9.38□□□□□ -0.91
MTHFRP42898 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 PTPRVP-201ENST00000482597 3999 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
MTHFRP42898 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms