Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 UBTFL11-201ENST00000428234 2252 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 FHL2-207ENST00000409177 4881 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 AC211476.4-201ENST00000275546 699 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 RNA5SP74-201ENST00000363538 109 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 ITGB3BP-202ENST00000371092 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 TMEM254-203ENST00000372275 860 ntTSL 2 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 CST9LP1-201ENST00000376987 444 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 MIR185-201ENST00000385288 82 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 PMS2P5-201ENST00000398065 516 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 RN7SKP94-201ENST00000411044 284 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 FGL1-205ENST00000427924 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 Z97634.1-203ENST00000435229 471 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 CYP2C58P-201ENST00000436281 475 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 YAE1D1-203ENST00000448268 425 ntTSL 2 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 AC020718.1-201ENST00000456031 556 ntTSL 4 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 RN7SL316P-201ENST00000483452 272 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 AC010261.2-202ENST00000506875 494 ntTSL 5 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 AC073848.1-201ENST00000514339 457 ntTSL 3 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 IGLC5-201ENST00000519670 293 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 NDUFC2-202ENST00000525085 495 ntTSL 3 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 AC022880.2-201ENST00000532664 270 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 NDUFC2-205ENST00000534029 422 ntTSL 2 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 AC009120.2-202ENST00000566411 679 ntTSL 3 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 CDRT7-201ENST00000568256 767 ntTSL 3 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 AC007663.4-201ENST00000608275 631 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 uc_338.2-201ENST00000612963 182 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 ARL17A-206ENST00000622488 524 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 AC013444.1-201ENST00000428909 1904 ntBASIC9.38□□□□□ -0.91
LMO3Q8TAP4 TPH2-201ENST00000333850 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 PTPN20-216ENST00000506080 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 CLIP1-202ENST00000358808 5880 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 ATP9B-202ENST00000426216 4361 ntTSL 5 BASIC9.38□□□□□ -0.91
LMO3Q8TAP4 HCAR1-201ENST00000432564 4768 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 AL049636.1-201ENST00000455736 1357 ntBASIC9.37□□□□□ -0.91
LMO3Q8TAP4 PAX6-259ENST00000639916 2622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 EXOSC9-211ENST00000512454 1543 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 NEK10-203ENST00000383770 1257 ntTSL 5 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 IGLV3-1-201ENST00000390319 398 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 HP-204ENST00000398131 1252 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 BCAS2P3-201ENST00000416374 767 ntBASIC9.37□□□□□ -0.91
LMO3Q8TAP4 RPL34P1-201ENST00000450455 354 ntBASIC9.37□□□□□ -0.91
LMO3Q8TAP4 AC099681.1-201ENST00000454777 552 ntTSL 4 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 AC004917.1-202ENST00000475791 760 ntTSL 3 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 TDGF1P3-201ENST00000493351 567 ntBASIC9.37□□□□□ -0.91
LMO3Q8TAP4 AC068531.1-201ENST00000502398 195 ntBASIC9.37□□□□□ -0.91
LMO3Q8TAP4 AC046195.2-201ENST00000519652 541 ntTSL 4 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 WARSP1-201ENST00000533936 454 ntBASIC9.37□□□□□ -0.91
LMO3Q8TAP4 PROSER3-207ENST00000537459 772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 AC012414.3-201ENST00000559621 748 ntTSL 5 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 IGHV3OR16-15-201ENST00000565463 414 ntBASIC9.37□□□□□ -0.91
LMO3Q8TAP4 AC106037.1-201ENST00000584148 336 ntTSL 5 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 CU639417.5-201ENST00000623983 476 ntTSL 3 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 AL356481.2-201ENST00000629902 528 ntTSL 3 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 AP001528.3-201ENST00000624364 3249 ntBASIC9.37□□□□□ -0.91
LMO3Q8TAP4 NF1P1-201ENST00000604105 2645 ntBASIC9.37□□□□□ -0.91
LMO3Q8TAP4 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 AC010478.1-201ENST00000601500 6762 ntBASIC9.37□□□□□ -0.91
LMO3Q8TAP4 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 MCM8-203ENST00000378886 3835 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 NHSL2-208ENST00000639939 3402 ntTSL 5 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LMO3Q8TAP4 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 ZNF449-202ENST00000370761 2051 ntTSL 2 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 LRRC66-201ENST00000343457 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 NEK1-203ENST00000507142 5556 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AL008721.2-201ENST00000609475 3754 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 AL158206.1-201ENST00000563205 1965 ntBASIC9.36□□□□□ -0.91
LMO3Q8TAP4 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
LMO3Q8TAP4 CARF-201ENST00000320443 5209 ntTSL 2 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms