Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SEPT4-202ENST00000317268 1784 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 XRCC6P5-201ENST00000435236 1795 ntBASIC8.2□□□□□ -1.1
SNX18Q96RF0 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 CSTL1-201ENST00000246020 510 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 CSTL1-202ENST00000347397 736 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 RNU1-120P-201ENST00000363009 157 ntBASIC8.2□□□□□ -1.1
SNX18Q96RF0 TRBV10-1-201ENST00000390364 412 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 DYNLL1-202ENST00000392508 697 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 RPSAP63-201ENST00000412013 888 ntBASIC8.2□□□□□ -1.1
SNX18Q96RF0 LINC01238-201ENST00000416204 590 ntTSL 2 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 AL121999.1-201ENST00000420156 332 ntTSL 3 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 AL161638.2-201ENST00000427319 507 ntTSL 3 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 FAM136BP-201ENST00000428729 417 ntBASIC8.2□□□□□ -1.1
SNX18Q96RF0 EMC3-202ENST00000429759 751 ntTSL 3 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 AL109754.1-201ENST00000449270 1036 ntTSL 2 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 LINC01501-203ENST00000449990 791 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 AC010982.1-201ENST00000450325 465 ntTSL 4 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 AL158090.1-201ENST00000453921 602 ntTSL 2 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 RN7SL144P-201ENST00000475761 295 ntBASIC8.2□□□□□ -1.1
SNX18Q96RF0 TECRP1-201ENST00000513307 445 ntBASIC8.2□□□□□ -1.1
SNX18Q96RF0 IGKV2-14-201ENST00000517571 347 ntBASIC8.2□□□□□ -1.1
SNX18Q96RF0 ANKRD46-203ENST00000519316 713 ntTSL 5 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 AC044836.1-201ENST00000519514 274 ntBASIC8.2□□□□□ -1.1
SNX18Q96RF0 INTS4-205ENST00000527522 956 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 AC103855.2-202ENST00000527642 568 ntTSL 4 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 AP001767.3-201ENST00000533329 436 ntTSL 5 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 AP001189.4-201ENST00000533588 452 ntTSL 3 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 GAPLINC-203ENST00000581029 613 ntTSL 3 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 PPP3CB-AS1-211ENST00000600887 489 ntTSL 5 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 MTND6P22-201ENST00000604233 521 ntBASIC8.2□□□□□ -1.1
SNX18Q96RF0 AC016747.3-201ENST00000609422 791 ntBASIC8.2□□□□□ -1.1
SNX18Q96RF0 RPS20-212ENST00000618656 627 ntTSL 3 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 RDM1-229ENST00000639942 420 ntTSL 5 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 EBNA1BP2-201ENST00000236051 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 AC020978.8-201ENST00000571975 3022 ntBASIC8.2□□□□□ -1.1
SNX18Q96RF0 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 ZNF192P2-201ENST00000402215 1383 ntBASIC8.2□□□□□ -1.1
SNX18Q96RF0 CSMD2-AS1-202ENST00000425631 1367 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 AC068547.1-203ENST00000637559 1373 ntAPPRIS P5 TSL 5 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 MKNK1-AS1-201ENST00000602433 2445 ntTSL 2 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 IKZF3-209ENST00000377952 1435 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 LIPM-201ENST00000404743 1439 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 GPR1-210ENST00000621141 2156 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 HSPA8P16-201ENST00000454171 1865 ntBASIC8.19□□□□□ -1.1
SNX18Q96RF0 LINC02239-201ENST00000504339 2290 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 ARHGAP25-209ENST00000479844 1933 ntTSL 5 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 AP001527.1-201ENST00000566440 1957 ntBASIC8.19□□□□□ -1.1
SNX18Q96RF0 TDP1-202ENST00000393452 2370 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 RSU1-205ENST00000602389 3639 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 C17orf80-206ENST00000577615 2049 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 HMHB1-201ENST00000289448 384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 GDF3-201ENST00000329913 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 SPACA9-201ENST00000350499 894 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 SUN5-201ENST00000356173 1254 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 LEUTX-201ENST00000396841 671 ntTSL 2 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 AC079834.1-201ENST00000414016 421 ntBASIC8.19□□□□□ -1.1
SNX18Q96RF0 DCUN1D2-AS-201ENST00000414992 330 ntTSL 3 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 LINC01090-201ENST00000415357 881 ntTSL 3 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 MED15P4-201ENST00000417579 393 ntBASIC8.19□□□□□ -1.1
SNX18Q96RF0 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 AC013399.1-201ENST00000450311 418 ntBASIC8.19□□□□□ -1.1
SNX18Q96RF0 AL606490.6-201ENST00000453735 523 ntBASIC8.19□□□□□ -1.1
SNX18Q96RF0 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 CAMTA1-210ENST00000476864 714 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 AC048341.1-201ENST00000480482 403 ntBASIC8.19□□□□□ -1.1
SNX18Q96RF0 RN7SL242P-201ENST00000491451 297 ntBASIC8.19□□□□□ -1.1
SNX18Q96RF0 EVX1-AS-201ENST00000517726 480 ntTSL 3 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 STMN2-202ENST00000518111 799 ntTSL 3 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 OR9G3P-201ENST00000525553 918 ntBASIC8.19□□□□□ -1.1
SNX18Q96RF0 AP002360.1-204ENST00000529331 700 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 H2AFZP4-201ENST00000534148 377 ntBASIC8.19□□□□□ -1.1
SNX18Q96RF0 AC008770.2-201ENST00000547473 542 ntAPPRIS P1 TSL 4 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 AC023511.1-201ENST00000549055 571 ntTSL 3 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 CD300LF-208ENST00000581500 720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 AC091132.5-201ENST00000590995 560 ntTSL 5 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 AL354740.1-202ENST00000612837 290 ntTSL 3 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 CAMKMT-210ENST00000613618 594 ntTSL 5 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 AC244472.5-201ENST00000619103 344 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 AC097493.5-201ENST00000641103 1010 ntBASIC8.19□□□□□ -1.1
SNX18Q96RF0 RACGAP1-209ENST00000547905 2190 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 AC005538.2-201ENST00000623215 1864 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms