Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC8.17□□□□□ -1.1
P04436 KDM2B-206ENST00000538046 2301 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
P04436 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
P04436 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 STPG1-203ENST00000374409 2804 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
P04436 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 MAPT-AS1-204ENST00000634876 3602 ntTSL 5 BASIC8.16□□□□□ -1.1
P04436 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 ERG-210ENST00000442448 5034 ntTSL 5 BASIC8.16□□□□□ -1.1
P04436 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.16□□□□□ -1.1
P04436 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 CEACAM5-201ENST00000221992 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 ZSCAN23-201ENST00000289788 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 BEST3-203ENST00000331471 1506 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 TAGAP-202ENST00000338313 1183 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 AGMO-201ENST00000342526 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 SUN5-201ENST00000356173 1254 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 RNA5-8SP2-201ENST00000363564 152 ntBASIC8.16□□□□□ -1.1
P04436 RN7SKP204-201ENST00000365481 310 ntBASIC8.16□□□□□ -1.1
P04436 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC8.16□□□□□ -1.1
P04436 RSU1-203ENST00000377921 3919 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 TRBV10-1-201ENST00000390364 412 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
P04436 RAD51B-201ENST00000390683 922 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC8.16□□□□□ -1.1
P04436 RNA5SP203-201ENST00000410451 136 ntBASIC8.16□□□□□ -1.1
P04436 AC018866.1-202ENST00000421820 470 ntTSL 2 BASIC8.16□□□□□ -1.1
P04436 AC012354.2-201ENST00000423051 461 ntBASIC8.16□□□□□ -1.1
P04436 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
P04436 LRRC37A11P-201ENST00000425901 3580 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 CDKN2B-AS1-203ENST00000428597 3835 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 AC114492.1-201ENST00000434936 454 ntBASIC8.16□□□□□ -1.1
P04436 Z98747.1-201ENST00000438791 356 ntTSL 3 BASIC8.16□□□□□ -1.1
P04436 AC006463.1-201ENST00000445929 232 ntBASIC8.16□□□□□ -1.1
P04436 RBMY2OP-201ENST00000447105 810 ntBASIC8.16□□□□□ -1.1
P04436 AL022318.1-201ENST00000450216 678 ntTSL 3 BASIC8.16□□□□□ -1.1
P04436 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC8.16□□□□□ -1.1
P04436 AL450023.2-201ENST00000453276 545 ntBASIC8.16□□□□□ -1.1
P04436 AC104619.1-201ENST00000459634 631 ntBASIC8.16□□□□□ -1.1
P04436 RN7SL156P-201ENST00000480334 304 ntBASIC8.16□□□□□ -1.1
P04436 RN7SL573P-201ENST00000485340 276 ntBASIC8.16□□□□□ -1.1
P04436 RPL36P16-201ENST00000496996 306 ntBASIC8.16□□□□□ -1.1
P04436 AC026787.1-201ENST00000504182 420 ntTSL 5 BASIC8.16□□□□□ -1.1
P04436 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 AL158819.1-201ENST00000514681 398 ntBASIC8.16□□□□□ -1.1
P04436 AC010834.2-201ENST00000523945 530 ntTSL 3 BASIC8.16□□□□□ -1.1
P04436 IGHV3-75-201ENST00000523951 358 ntBASIC8.16□□□□□ -1.1
P04436 OR10Y1P-201ENST00000528485 974 ntBASIC8.16□□□□□ -1.1
P04436 PCED1B-AS1-204ENST00000547851 780 ntTSL 3 BASIC8.16□□□□□ -1.1
P04436 STXBP6-206ENST00000548369 682 ntTSL 2 BASIC8.16□□□□□ -1.1
P04436 LINC02373-201ENST00000549261 423 ntTSL 3 BASIC8.16□□□□□ -1.1
P04436 AC020892.2-201ENST00000557891 387 ntTSL 3 BASIC8.16□□□□□ -1.1
P04436 AF067845.1-201ENST00000567210 1192 ntBASIC8.16□□□□□ -1.1
P04436 MKL2-207ENST00000573051 1938 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 ZSCAN32-212ENST00000574940 2180 ntTSL 2 BASIC8.16□□□□□ -1.1
P04436 RN7SL670P-201ENST00000577235 294 ntBASIC8.16□□□□□ -1.1
P04436 AP001178.2-201ENST00000580007 326 ntTSL 3 BASIC8.16□□□□□ -1.1
P04436 AC018697.1-202ENST00000582650 592 ntTSL 4 BASIC8.16□□□□□ -1.1
P04436 ACSBG2-205ENST00000588304 2759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC8.16□□□□□ -1.1
P04436 NFKB1-212ENST00000600343 4010 ntTSL 2 BASIC8.16□□□□□ -1.1
P04436 CR769775.3-201ENST00000610388 219 ntBASIC8.16□□□□□ -1.1
P04436 Metazoa_SRP.98-201ENST00000610878 274 ntBASIC8.16□□□□□ -1.1
P04436 CPEB1-207ENST00000611031 3074 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
P04436 AC215522.1-201ENST00000615488 446 ntBASIC8.16□□□□□ -1.1
P04436 AC245505.3-201ENST00000616788 358 ntBASIC8.16□□□□□ -1.1
P04436 AL355987.5-201ENST00000621585 411 ntBASIC8.16□□□□□ -1.1
P04436 NF1P9-201ENST00000629326 2008 ntBASIC8.16□□□□□ -1.1
P04436 ASNSP1-202ENST00000641079 1352 ntBASIC8.16□□□□□ -1.1
P04436 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC8.16□□□□□ -1.1
P04436 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 LINC01012-204ENST00000629732 2771 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
P04436 AL354740.1-201ENST00000586726 2681 ntTSL 5 BASIC8.16□□□□□ -1.1
P04436 LY9-201ENST00000263285 2443 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 AL138690.1-201ENST00000568811 2243 ntBASIC8.15□□□□□ -1.1
P04436 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC8.15□□□□□ -1.1
P04436 DHRS9-206ENST00000436483 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 FP565260.7-201ENST00000623998 3634 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
P04436 TNS1-202ENST00000310858 1792 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 AP002748.4-201ENST00000419755 3547 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
P04436 ABCC2-201ENST00000370434 1714 ntTSL 2 BASIC8.15□□□□□ -1.1
P04436 APTX-207ENST00000397172 1740 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
P04436 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 MBP-206ENST00000397863 4800 ntTSL 3 BASIC8.15□□□□□ -1.1
P04436 PDPN-201ENST00000294489 3104 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 NVL-216ENST00000482491 3003 ntTSL 5 BASIC8.15□□□□□ -1.1
P04436 CLDN2-201ENST00000336803 2959 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
P04436 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 KCNK2-202ENST00000391895 1410 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 PTPN20-205ENST00000395721 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 FAM122B-206ENST00000486347 1381 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.1
P04436 PAX6-273ENST00000640610 2730 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC8.15□□□□□ -1.1
P04436 CRYGA-201ENST00000304502 609 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 MTCP1-201ENST00000362018 570 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
P04436 LDHAP7-201ENST00000398295 965 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms