Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC01444-202ENST00000581211 654 ntTSL 3 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AC023855.1-201ENST00000585899 359 ntTSL 4 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AC011416.3-201ENST00000603971 355 ntBASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AC025518.2-201ENST00000605229 492 ntBASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 FAM238B-204ENST00000612040 423 ntBASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AC067904.3-201ENST00000617126 261 ntBASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AC013489.3-201ENST00000623274 517 ntBASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 C1orf137-201ENST00000624685 386 ntTSL 3 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 ITFG2-AS1-202ENST00000636122 962 ntTSL 5 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 SMAP2-206ENST00000614549 2570 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AC009163.7-201ENST00000621929 2557 ntBASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 UGT2B7-203ENST00000508661 1633 ntTSL 2 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AL117192.1-202ENST00000557689 1990 ntTSL 2 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 UBE3B-207ENST00000537063 3600 ntTSL 3 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 CEACAM21-201ENST00000187608 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 MBP-206ENST00000397863 4800 ntTSL 3 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 UNC5D-205ENST00000449677 2448 ntTSL 2 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 ZSCAN23-201ENST00000289788 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 MDH1B-204ENST00000449792 1757 ntTSL 5 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 MDH1B-205ENST00000454776 1795 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 KCNK2-202ENST00000391895 1410 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AC024600.1-201ENST00000425902 2572 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 TCTN3-207ENST00000614499 2739 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 UBLCP1-201ENST00000296786 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 RND3-203ENST00000409557 2372 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 NAALAD2-210ENST00000534061 3600 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 MCTP2-203ENST00000451018 2472 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 KCNE1-201ENST00000337385 3347 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 RNU1-120P-201ENST00000363009 157 ntBASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 GSTA5-202ENST00000370989 892 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 ZDHHC11B-201ENST00000382776 1116 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 ASS1P8-201ENST00000504437 647 ntBASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 ACTBP6-201ENST00000520036 1090 ntBASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 AC022239.1-201ENST00000527922 435 ntTSL 5 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 LRTOMT-216ENST00000539271 570 ntTSL 4 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 AC020892.2-201ENST00000557891 387 ntTSL 3 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 AC073878.1-201ENST00000567503 474 ntTSL 3 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 GAPLINC-203ENST00000581029 613 ntTSL 3 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 AC007785.3-201ENST00000595955 544 ntTSL 5 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 AC104958.2-201ENST00000605955 1141 ntBASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 ZNF75A-209ENST00000612186 1118 ntBASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 AC009237.16-201ENST00000612987 506 ntBASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 MIR6732-201ENST00000619365 60 ntBASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 AL109653.2-201ENST00000625029 1065 ntBASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 AC007326.3-201ENST00000636418 176 ntBASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 BLNK-202ENST00000371176 1715 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 AC012354.1-201ENST00000425325 2685 ntTSL 3 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 ALDOB-203ENST00000616752 1391 ntTSL 5 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 STAG3-202ENST00000394018 4163 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 DCTN1-205ENST00000409567 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPIPA3F8WFD2 CLUHP3-206ENST00000562354 4117 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AL139020.1-203ENST00000556386 2738 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 OR3A1-201ENST00000323404 1650 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 NRXN3-215ENST00000557594 3381 ntTSL 2 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 NOS1-203ENST00000344089 4340 ntTSL 5 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 OR51G2-201ENST00000322013 1023 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 SMIM9-201ENST00000369529 904 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 TMED5-201ENST00000370280 750 ntTSL 2 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 MAS1L-201ENST00000377127 1260 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 MITF-205ENST00000394348 1069 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 SET-205ENST00000409104 962 ntTSL 5 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 RPL7AP72-201ENST00000417266 768 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AP000532.1-201ENST00000440999 177 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AC022398.1-201ENST00000441001 510 ntTSL 5 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 MTND6P15-201ENST00000441157 521 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 PGA5-202ENST00000451616 971 ntTSL 2 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 TMED10P2-201ENST00000474255 612 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 GAPDHP47-201ENST00000489113 999 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 PLA2G12AP1-201ENST00000497678 568 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 NR1I3-219ENST00000504010 944 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 TRIM60P15-201ENST00000509929 712 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AL158819.1-201ENST00000514681 398 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 RNA5SP459-201ENST00000516628 100 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 TCEA1-206ENST00000520534 635 ntTSL 2 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AC144568.2-201ENST00000522481 944 ntTSL 5 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AC084128.1-201ENST00000523112 501 ntTSL 3 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms