Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
NPIPA3F8WFD2 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
NPIPA3F8WFD2 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC8.21□□□□□ -1.09
NPIPA3F8WFD2 PAX6-273ENST00000640610 2730 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NPIPA3F8WFD2 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 SLC7A7-215ENST00000555702 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 OR10T2-201ENST00000334438 945 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 OR2AG2-201ENST00000338569 1069 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 NINJ2-202ENST00000397265 793 ntAPPRIS ALT2 TSL 3 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 LDHAP7-201ENST00000398295 965 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 SNRPGP11-201ENST00000411777 232 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 RPSAP21-201ENST00000414293 885 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 AL161638.2-201ENST00000427319 507 ntTSL 3 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 FGL1-205ENST00000427924 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 FTLP4-201ENST00000430740 493 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 AL109810.1-201ENST00000435008 495 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 P2RX6P-201ENST00000439119 468 ntTSL 3 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 AL133387.1-201ENST00000442188 382 ntTSL 3 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 NPM1P51-201ENST00000443470 744 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 PMS2P10-201ENST00000447708 612 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 IGLV3-29-201ENST00000520084 244 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 CASP1-204ENST00000525825 1237 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 AC109635.2-202ENST00000529219 500 ntTSL 3 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 ZNF123P-201ENST00000531501 1196 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 LDHA-220ENST00000542179 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 AC083805.2-201ENST00000549683 610 ntTSL 2 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 AL049873.2-201ENST00000555790 498 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 AC009139.1-201ENST00000561672 652 ntTSL 2 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 MIR3972-201ENST00000582732 87 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 LINC01764-201ENST00000587970 380 ntTSL 4 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 SLC25A6P5-202ENST00000602729 1038 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 KHDC1-206ENST00000610330 632 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 uc_338.3-201ENST00000613268 181 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 GNAS-AS1_5.1-201ENST00000614281 121 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 AL132821.1-201ENST00000616029 394 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 EAF1-AS1-212ENST00000626521 561 ntTSL 5 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 GUCY1A3-208ENST00000511507 2552 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 PTPN20-201ENST00000374218 2872 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 AL137025.1-201ENST00000436932 2378 ntTSL 2 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 CTBP2P2-201ENST00000434549 1334 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 C17orf80-205ENST00000535032 2129 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 GAD1-217ENST00000625689 3700 ntTSL 5 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 AC100827.4-201ENST00000563464 2441 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 CCDC144B-201ENST00000285176 4310 ntBASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 NTRK3-220ENST00000626019 2741 ntTSL 5 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 MARCH1-214ENST00000514618 3903 ntTSL 5 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 CELF2-215ENST00000636488 3908 ntTSL 5 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 TGFB3-201ENST00000238682 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 RCAN1-210ENST00000487990 2520 ntTSL 2 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC8.21□□□□□ -1.1
NPIPA3F8WFD2 CLRN1-201ENST00000295911 1444 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 ZNF726-201ENST00000322487 2330 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 KDM2B-206ENST00000538046 2301 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 LINC01344-203ENST00000608183 2631 ntTSL 2 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 WDR20-206ENST00000454394 2067 ntTSL 2 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 OIT3-201ENST00000334011 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 TMEM108-AS1-202ENST00000505721 2427 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 GOLGA8B-201ENST00000342314 4335 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 C3P1-202ENST00000497718 4954 ntBASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 SLC30A8-202ENST00000456015 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 TMED6-201ENST00000288025 938 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 C4BPB-202ENST00000367076 1113 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 RNASE1-203ENST00000397970 769 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 RPSAP63-201ENST00000412013 888 ntBASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 MIATNB-201ENST00000417083 706 ntTSL 3 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 RPL13AP7-201ENST00000425147 611 ntBASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AC091808.1-201ENST00000438867 786 ntTSL 3 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AC002064.1-201ENST00000445784 733 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 ACTG1P20-201ENST00000486001 468 ntBASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 RN7SL62P-201ENST00000498506 297 ntBASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 LINC01095-203ENST00000512063 1175 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 MIR100HG-211ENST00000531071 970 ntTSL 3 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 CACNA1C-AS3-201ENST00000543559 444 ntTSL 5 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 PHBP19-201ENST00000547512 754 ntBASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AL352977.1-201ENST00000553464 453 ntTSL 5 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 LINC01579-201ENST00000553818 561 ntTSL 4 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 LINC00520-202ENST00000554196 514 ntTSL 3 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 HP-207ENST00000562526 685 ntTSL 3 BASIC8.2□□□□□ -1.1
NPIPA3F8WFD2 AC138512.1-201ENST00000563190 434 ntTSL 3 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms