Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 AC099398.1-201ENST00000567919 2776 ntBASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 AL359258.2-201ENST00000564063 1566 ntBASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPCS1Q9Y6A9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 AC139713.2-201ENST00000641328 2723 ntBASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC14.07□□□□□ -0.16
SPCS1Q9Y6A9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 AL390961.4-201ENST00000623958 2535 ntBASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS1Q9Y6A9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 PRORSD1P-202ENST00000563365 2154 ntBASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SPCS1Q9Y6A9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms