Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 AL512408.1-201ENST00000569378 2000 ntBASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CYP46A1Q9Y6A2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 AC092720.2-201ENST00000602388 1665 ntBASIC24.27■■□□□ 1.48
CYP46A1Q9Y6A2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 AL162377.1-201ENST00000618844 1793 ntBASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.26■■□□□ 1.47
CYP46A1Q9Y6A2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CYP46A1Q9Y6A2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CYP46A1Q9Y6A2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
CYP46A1Q9Y6A2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CYP46A1Q9Y6A2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CYP46A1Q9Y6A2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CYP46A1Q9Y6A2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.24■■□□□ 1.47
CYP46A1Q9Y6A2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CYP46A1Q9Y6A2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CYP46A1Q9Y6A2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CYP46A1Q9Y6A2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.24■■□□□ 1.47
CYP46A1Q9Y6A2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CYP46A1Q9Y6A2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.24■■□□□ 1.47
CYP46A1Q9Y6A2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CYP46A1Q9Y6A2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 SAPCD2P1-201ENST00000395413 1184 ntBASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CYP46A1Q9Y6A2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 CDV3P1-201ENST00000471403 739 ntBASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CYP46A1Q9Y6A2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms