Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC137761.2-201ENST00000561729 223 ntBASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 AC145350.3-201ENST00000569033 163 ntBASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 KRT18P61-201ENST00000585825 1298 ntBASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 AC004854.2-201ENST00000608450 1441 ntBASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGB3Q9Y5G1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 AC010141.2-201ENST00000452426 721 ntBASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PCDHGB3Q9Y5G1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 KRT18P20-201ENST00000548986 1279 ntBASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 AC121338.2-201ENST00000622535 1744 ntBASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGB3Q9Y5G1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGB3Q9Y5G1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PCDHGB3Q9Y5G1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGB3Q9Y5G1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGB3Q9Y5G1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGB3Q9Y5G1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PCDHGB3Q9Y5G1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 AC104187.1-201ENST00000607510 612 ntBASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PCDHGB3Q9Y5G1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms