Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 AC142381.4-202ENST00000563973 229 ntBASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 AC008175.2-201ENST00000612840 297 ntBASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHGC5Q9Y5F6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 AC120498.10-201ENST00000621827 505 ntBASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC5Q9Y5F6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC5Q9Y5F6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 AC061975.6-201ENST00000579045 1553 ntBASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 AL591742.1-201ENST00000604433 565 ntBASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.46■■□□□ 1.19
PCDHGC5Q9Y5F6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 AP006294.2-201ENST00000641667 209 ntBASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGC5Q9Y5F6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms