Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 AC137761.2-201ENST00000561729 223 ntBASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 AC145350.3-201ENST00000569033 163 ntBASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 PCDHAC2-203ENST00000615316 3011 ntBASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 AL512408.1-201ENST00000569378 2000 ntBASIC16.35■□□□□ 0.21
LSM4Q9Y4Z0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 CDCA4P2-201ENST00000441182 718 ntBASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.34■□□□□ 0.21
LSM4Q9Y4Z0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LSM4Q9Y4Z0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.33■□□□□ 0.21
LSM4Q9Y4Z0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LSM4Q9Y4Z0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.33■□□□□ 0.21
LSM4Q9Y4Z0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 AC073111.5-205ENST00000641717 521 ntBASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LSM4Q9Y4Z0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 AP004607.4-201ENST00000530158 1459 ntBASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LSM4Q9Y4Z0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSM4Q9Y4Z0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms