Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 AL162412.1-201ENST00000567129 965 ntBASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 OR10C1-204ENST00000622521 1039 ntBASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.71■□□□□ 0.59
RPH3AQ9Y2J0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RPH3AQ9Y2J0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 SLC29A4P1-201ENST00000398760 971 ntBASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 TSPY6P-201ENST00000448518 926 ntBASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPH3AQ9Y2J0 MKRN4P-201ENST00000444706 1521 ntBASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 FAM21FP-204ENST00000608637 956 ntBASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RPH3AQ9Y2J0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPH3AQ9Y2J0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RPH3AQ9Y2J0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.68■□□□□ 0.58
RPH3AQ9Y2J0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.68■□□□□ 0.58
RPH3AQ9Y2J0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.68■□□□□ 0.58
RPH3AQ9Y2J0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RPH3AQ9Y2J0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.68■□□□□ 0.58
RPH3AQ9Y2J0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.68■□□□□ 0.58
RPH3AQ9Y2J0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.68■□□□□ 0.58
RPH3AQ9Y2J0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPH3AQ9Y2J0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPH3AQ9Y2J0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPH3AQ9Y2J0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.68■□□□□ 0.58
RPH3AQ9Y2J0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 GUSBP6-202ENST00000438529 1198 ntBASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RPH3AQ9Y2J0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms