Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERGIC3Q9Y282 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERGIC3Q9Y282 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 FP700111.2-201ENST00000619190 1892 ntBASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 AC099778.1-201ENST00000568593 1911 ntBASIC18.61■□□□□ 0.57
ERGIC3Q9Y282 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 TSPY9P-201ENST00000440215 945 ntBASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 TSPY11P-201ENST00000442607 1045 ntBASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 AC099791.2-201ENST00000605725 427 ntBASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERGIC3Q9Y282 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 MIR3181-201ENST00000578512 73 ntBASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERGIC3Q9Y282 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms