Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COPS3Q9UNS2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
COPS3Q9UNS2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
COPS3Q9UNS2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.2■□□□□ 0.5
COPS3Q9UNS2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPS3Q9UNS2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 RARRES2P11-201ENST00000635158 484 ntBASIC18.19■□□□□ 0.5
COPS3Q9UNS2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.19■□□□□ 0.5
COPS3Q9UNS2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 AL354811.1-201ENST00000610286 706 ntBASIC18.18■□□□□ 0.5
COPS3Q9UNS2 AC008175.2-201ENST00000612840 297 ntBASIC18.18■□□□□ 0.5
COPS3Q9UNS2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 MIR6084-201ENST00000622012 110 ntBASIC18.18■□□□□ 0.5
COPS3Q9UNS2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COPS3Q9UNS2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 POU5F1P4-201ENST00000413175 1085 ntBASIC18.17■□□□□ 0.5
COPS3Q9UNS2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 SUDS3P1-201ENST00000505831 966 ntBASIC18.17■□□□□ 0.5
COPS3Q9UNS2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms