Protein–RNA interactions for Protein: Q9UBE0

SAE1, SUMO-activating enzyme subunit 1, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAE1Q9UBE0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SAE1Q9UBE0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
SAE1Q9UBE0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SAE1Q9UBE0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.17■□□□□ 0.98
SAE1Q9UBE0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.17■□□□□ 0.98
SAE1Q9UBE0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SAE1Q9UBE0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SAE1Q9UBE0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 SLC7A5P1-201ENST00000568957 537 ntBASIC21.16■□□□□ 0.98
SAE1Q9UBE0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SAE1Q9UBE0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 AL162377.1-201ENST00000618844 1793 ntBASIC21.15■□□□□ 0.98
SAE1Q9UBE0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SAE1Q9UBE0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SAE1Q9UBE0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SAE1Q9UBE0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SAE1Q9UBE0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
SAE1Q9UBE0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SAE1Q9UBE0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.14■□□□□ 0.98
SAE1Q9UBE0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 AC243732.1-201ENST00000612648 864 ntBASIC21.14■□□□□ 0.97
SAE1Q9UBE0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SAE1Q9UBE0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 AFG3L1P-217ENST00000557444 2447 ntBASIC21.13■□□□□ 0.97
SAE1Q9UBE0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 MYCNOS-205ENST00000641950 531 ntBASIC21.13■□□□□ 0.97
SAE1Q9UBE0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SAE1Q9UBE0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 AC026271.2-201ENST00000428091 497 ntBASIC21.12■□□□□ 0.97
SAE1Q9UBE0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms