Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 NOC2LP2-201ENST00000407594 1944 ntBASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CDC42SE1Q9NRR8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 AL596257.1-201ENST00000641463 2694 ntBASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 CEP83-AS1-201ENST00000623122 2482 ntBASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CDC42SE1Q9NRR8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
CDC42SE1Q9NRR8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms