Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
ZFYVE28Q9HCC9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZFYVE28Q9HCC9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ZFYVE28Q9HCC9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZFYVE28Q9HCC9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZFYVE28Q9HCC9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.57■■□□□ 1.36
ZFYVE28Q9HCC9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
ZFYVE28Q9HCC9 AL353807.1-201ENST00000427475 662 ntBASIC23.57■■□□□ 1.36
ZFYVE28Q9HCC9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
ZFYVE28Q9HCC9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ZFYVE28Q9HCC9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZFYVE28Q9HCC9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZFYVE28Q9HCC9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.57■■□□□ 1.36
ZFYVE28Q9HCC9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.56■■□□□ 1.36
ZFYVE28Q9HCC9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 KRT16P5-201ENST00000455284 522 ntBASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 AL356652.1-201ENST00000615962 565 ntBASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.55■■□□□ 1.36
ZFYVE28Q9HCC9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 AC005521.1-201ENST00000393351 872 ntBASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 FAM197Y1-201ENST00000421178 764 ntBASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZFYVE28Q9HCC9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ZFYVE28Q9HCC9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ZFYVE28Q9HCC9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZFYVE28Q9HCC9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.53■■□□□ 1.36
ZFYVE28Q9HCC9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC23.53■■□□□ 1.36
ZFYVE28Q9HCC9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.53■■□□□ 1.36
ZFYVE28Q9HCC9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC23.53■■□□□ 1.36
ZFYVE28Q9HCC9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
ZFYVE28Q9HCC9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
ZFYVE28Q9HCC9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.53■■□□□ 1.36
ZFYVE28Q9HCC9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.53■■□□□ 1.36
ZFYVE28Q9HCC9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZFYVE28Q9HCC9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZFYVE28Q9HCC9 AL121829.2-201ENST00000620908 328 ntBASIC23.52■■□□□ 1.36
ZFYVE28Q9HCC9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZFYVE28Q9HCC9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZFYVE28Q9HCC9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZFYVE28Q9HCC9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZFYVE28Q9HCC9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZFYVE28Q9HCC9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.51■■□□□ 1.35
ZFYVE28Q9HCC9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
ZFYVE28Q9HCC9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.51■■□□□ 1.35
ZFYVE28Q9HCC9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
ZFYVE28Q9HCC9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZFYVE28Q9HCC9 NME3-204ENST00000563498 920 ntTSL 2 BASIC23.51■■□□□ 1.35
ZFYVE28Q9HCC9 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.51■■□□□ 1.35
ZFYVE28Q9HCC9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.51■■□□□ 1.35
ZFYVE28Q9HCC9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZFYVE28Q9HCC9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms