Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VIPAS39Q9H9C1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VIPAS39Q9H9C1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VIPAS39Q9H9C1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VIPAS39Q9H9C1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 AC103724.3-201ENST00000564481 992 ntBASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.97■□□□□ 0.95
VIPAS39Q9H9C1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 AL138781.2-201ENST00000617896 1843 ntBASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.96■□□□□ 0.95
VIPAS39Q9H9C1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 AC006455.2-201ENST00000429931 906 ntBASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.95■□□□□ 0.94
VIPAS39Q9H9C1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 AC103834.1-201ENST00000520383 144 ntBASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VIPAS39Q9H9C1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
VIPAS39Q9H9C1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.93■□□□□ 0.94
VIPAS39Q9H9C1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.93■□□□□ 0.94
VIPAS39Q9H9C1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
VIPAS39Q9H9C1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.93■□□□□ 0.94
VIPAS39Q9H9C1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VIPAS39Q9H9C1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
VIPAS39Q9H9C1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.93■□□□□ 0.94
VIPAS39Q9H9C1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VIPAS39Q9H9C1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VIPAS39Q9H9C1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.92■□□□□ 0.94
VIPAS39Q9H9C1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VIPAS39Q9H9C1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VIPAS39Q9H9C1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VIPAS39Q9H9C1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VIPAS39Q9H9C1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms