Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NSUN3Q9H649 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NSUN3Q9H649 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.76■■□□□ 1.07
NSUN3Q9H649 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NSUN3Q9H649 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NSUN3Q9H649 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NSUN3Q9H649 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NSUN3Q9H649 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.76■■□□□ 1.07
NSUN3Q9H649 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
NSUN3Q9H649 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.76■■□□□ 1.07
NSUN3Q9H649 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NSUN3Q9H649 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NSUN3Q9H649 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.76■■□□□ 1.07
NSUN3Q9H649 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
NSUN3Q9H649 AL353708.3-201ENST00000610272 989 ntBASIC21.76■■□□□ 1.07
NSUN3Q9H649 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NSUN3Q9H649 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NSUN3Q9H649 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NSUN3Q9H649 AC233723.2-201ENST00000623798 2106 ntBASIC21.76■■□□□ 1.07
NSUN3Q9H649 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NSUN3Q9H649 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NSUN3Q9H649 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NSUN3Q9H649 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NSUN3Q9H649 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NSUN3Q9H649 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.75■■□□□ 1.07
NSUN3Q9H649 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NSUN3Q9H649 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.75■■□□□ 1.07
NSUN3Q9H649 AC116050.2-201ENST00000612102 1779 ntBASIC21.75■■□□□ 1.07
NSUN3Q9H649 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NSUN3Q9H649 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
NSUN3Q9H649 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.75■■□□□ 1.07
NSUN3Q9H649 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.75■■□□□ 1.07
NSUN3Q9H649 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NSUN3Q9H649 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NSUN3Q9H649 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NSUN3Q9H649 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NSUN3Q9H649 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.75■■□□□ 1.07
NSUN3Q9H649 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NSUN3Q9H649 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NSUN3Q9H649 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NSUN3Q9H649 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NSUN3Q9H649 ARMC10P1-201ENST00000313754 855 ntBASIC21.74■■□□□ 1.07
NSUN3Q9H649 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NSUN3Q9H649 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NSUN3Q9H649 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.74■■□□□ 1.07
NSUN3Q9H649 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.74■■□□□ 1.07
NSUN3Q9H649 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NSUN3Q9H649 AC026471.5-201ENST00000615068 467 ntBASIC21.74■■□□□ 1.07
NSUN3Q9H649 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.74■■□□□ 1.07
NSUN3Q9H649 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NSUN3Q9H649 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NSUN3Q9H649 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NSUN3Q9H649 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NSUN3Q9H649 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NSUN3Q9H649 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.73■■□□□ 1.07
NSUN3Q9H649 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NSUN3Q9H649 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.73■■□□□ 1.07
NSUN3Q9H649 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NSUN3Q9H649 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NSUN3Q9H649 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NSUN3Q9H649 AL390719.1-204ENST00000412397 1219 ntBASIC21.73■■□□□ 1.07
NSUN3Q9H649 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.73■■□□□ 1.07
NSUN3Q9H649 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NSUN3Q9H649 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NSUN3Q9H649 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NSUN3Q9H649 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
NSUN3Q9H649 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.73■■□□□ 1.07
NSUN3Q9H649 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NSUN3Q9H649 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.73■■□□□ 1.07
NSUN3Q9H649 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.73■■□□□ 1.07
NSUN3Q9H649 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NSUN3Q9H649 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.73■■□□□ 1.07
NSUN3Q9H649 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.73■■□□□ 1.07
NSUN3Q9H649 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NSUN3Q9H649 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 AC087633.2-202ENST00000565166 1439 ntBASIC21.72■■□□□ 1.07
NSUN3Q9H649 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.72■■□□□ 1.07
NSUN3Q9H649 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
NSUN3Q9H649 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NSUN3Q9H649 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.72■■□□□ 1.07
NSUN3Q9H649 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NSUN3Q9H649 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.72■■□□□ 1.07
NSUN3Q9H649 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.72■■□□□ 1.07
NSUN3Q9H649 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NSUN3Q9H649 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NSUN3Q9H649 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms