Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 PLK5-205ENST00000642079 1969 ntBASIC18.95■□□□□ 0.62
UBQLN3Q9H347 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 GUSBP6-202ENST00000438529 1198 ntBASIC18.94■□□□□ 0.62
UBQLN3Q9H347 AC083906.2-201ENST00000511578 360 ntBASIC18.94■□□□□ 0.62
UBQLN3Q9H347 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.94■□□□□ 0.62
UBQLN3Q9H347 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.93■□□□□ 0.62
UBQLN3Q9H347 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 TSPY6P-201ENST00000448518 926 ntBASIC18.92■□□□□ 0.62
UBQLN3Q9H347 AC245052.3-201ENST00000450182 901 ntBASIC18.92■□□□□ 0.62
UBQLN3Q9H347 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 AL591742.1-201ENST00000604433 565 ntBASIC18.92■□□□□ 0.62
UBQLN3Q9H347 AC092667.1-201ENST00000434301 2586 ntBASIC18.92■□□□□ 0.62
UBQLN3Q9H347 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.92■□□□□ 0.62
UBQLN3Q9H347 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 AF201337.1-201ENST00000520239 748 ntBASIC18.91■□□□□ 0.62
UBQLN3Q9H347 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
UBQLN3Q9H347 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms