Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRDQ9H2X0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRDQ9H2X0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHRDQ9H2X0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.66■□□□□ 0.9
CHRDQ9H2X0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRDQ9H2X0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRDQ9H2X0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRDQ9H2X0 AC080038.3-201ENST00000623346 1952 ntBASIC20.66■□□□□ 0.9
CHRDQ9H2X0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRDQ9H2X0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRDQ9H2X0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRDQ9H2X0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 AP003071.4-201ENST00000562276 1284 ntBASIC20.65■□□□□ 0.9
CHRDQ9H2X0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 RN7SL850P-201ENST00000579959 291 ntBASIC20.65■□□□□ 0.9
CHRDQ9H2X0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHRDQ9H2X0 FAM99A-202ENST00000538190 1989 ntBASIC20.65■□□□□ 0.9
CHRDQ9H2X0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHRDQ9H2X0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.64■□□□□ 0.9
CHRDQ9H2X0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRDQ9H2X0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHRDQ9H2X0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRDQ9H2X0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CHRDQ9H2X0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.64■□□□□ 0.89
CHRDQ9H2X0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.64■□□□□ 0.89
CHRDQ9H2X0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.64■□□□□ 0.89
CHRDQ9H2X0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRDQ9H2X0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRDQ9H2X0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRDQ9H2X0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRDQ9H2X0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRDQ9H2X0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.64■□□□□ 0.89
CHRDQ9H2X0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.63■□□□□ 0.89
CHRDQ9H2X0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 KRT18P35-201ENST00000510488 1269 ntBASIC20.63■□□□□ 0.89
CHRDQ9H2X0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 AL356652.1-201ENST00000615962 565 ntBASIC20.63■□□□□ 0.89
CHRDQ9H2X0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRDQ9H2X0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 MMP23A-201ENST00000234610 1017 ntBASIC20.62■□□□□ 0.89
CHRDQ9H2X0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRDQ9H2X0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRDQ9H2X0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRDQ9H2X0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHRDQ9H2X0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRDQ9H2X0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHRDQ9H2X0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHRDQ9H2X0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHRDQ9H2X0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHRDQ9H2X0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRDQ9H2X0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms