Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDT1Q9H211 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDT1Q9H211 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.23■■□□□ 1.15
CDT1Q9H211 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.23■■□□□ 1.15
CDT1Q9H211 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDT1Q9H211 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDT1Q9H211 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.23■■□□□ 1.15
CDT1Q9H211 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.23■■□□□ 1.15
CDT1Q9H211 MIR2861-201ENST00000636310 90 ntBASIC22.23■■□□□ 1.15
CDT1Q9H211 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.23■■□□□ 1.15
CDT1Q9H211 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDT1Q9H211 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDT1Q9H211 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CDT1Q9H211 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
CDT1Q9H211 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDT1Q9H211 ABHD17AP1-201ENST00000358206 933 ntBASIC22.22■■□□□ 1.15
CDT1Q9H211 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDT1Q9H211 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDT1Q9H211 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.22■■□□□ 1.15
CDT1Q9H211 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.22■■□□□ 1.15
CDT1Q9H211 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CDT1Q9H211 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDT1Q9H211 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
CDT1Q9H211 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDT1Q9H211 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.22■■□□□ 1.15
CDT1Q9H211 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.22■■□□□ 1.15
CDT1Q9H211 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.22■■□□□ 1.15
CDT1Q9H211 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDT1Q9H211 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDT1Q9H211 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDT1Q9H211 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDT1Q9H211 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CDT1Q9H211 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CDT1Q9H211 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDT1Q9H211 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDT1Q9H211 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDT1Q9H211 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.21■■□□□ 1.15
CDT1Q9H211 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.21■■□□□ 1.15
CDT1Q9H211 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CDT1Q9H211 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.21■■□□□ 1.15
CDT1Q9H211 TSPY20P-201ENST00000450910 630 ntBASIC22.21■■□□□ 1.15
CDT1Q9H211 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.21■■□□□ 1.15
CDT1Q9H211 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.21■■□□□ 1.15
CDT1Q9H211 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDT1Q9H211 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CDT1Q9H211 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CDT1Q9H211 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
CDT1Q9H211 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CDT1Q9H211 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDT1Q9H211 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
CDT1Q9H211 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CDT1Q9H211 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDT1Q9H211 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDT1Q9H211 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.2■■□□□ 1.14
CDT1Q9H211 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.2■■□□□ 1.14
CDT1Q9H211 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.2■■□□□ 1.14
CDT1Q9H211 C2orf69P4-201ENST00000565394 541 ntBASIC22.2■■□□□ 1.14
CDT1Q9H211 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDT1Q9H211 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.2■■□□□ 1.14
CDT1Q9H211 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDT1Q9H211 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CDT1Q9H211 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDT1Q9H211 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.2■■□□□ 1.14
CDT1Q9H211 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CDT1Q9H211 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDT1Q9H211 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.19■■□□□ 1.14
CDT1Q9H211 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDT1Q9H211 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.19■■□□□ 1.14
CDT1Q9H211 KRT8P36-201ENST00000489121 1440 ntBASIC22.19■■□□□ 1.14
CDT1Q9H211 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDT1Q9H211 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDT1Q9H211 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.19■■□□□ 1.14
CDT1Q9H211 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDT1Q9H211 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.19■■□□□ 1.14
CDT1Q9H211 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CDT1Q9H211 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.19■■□□□ 1.14
CDT1Q9H211 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDT1Q9H211 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDT1Q9H211 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.18■■□□□ 1.14
CDT1Q9H211 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDT1Q9H211 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDT1Q9H211 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.18■■□□□ 1.14
CDT1Q9H211 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.18■■□□□ 1.14
CDT1Q9H211 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDT1Q9H211 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.18■■□□□ 1.14
CDT1Q9H211 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDT1Q9H211 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDT1Q9H211 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDT1Q9H211 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDT1Q9H211 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDT1Q9H211 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDT1Q9H211 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.18■■□□□ 1.14
CDT1Q9H211 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.18■■□□□ 1.14
CDT1Q9H211 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CDT1Q9H211 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
CDT1Q9H211 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CDT1Q9H211 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.18■■□□□ 1.14
CDT1Q9H211 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.18■■□□□ 1.14
CDT1Q9H211 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDT1Q9H211 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms