Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 CROCCP2-202ENST00000412962 2773 ntBASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CYSTM1Q9H1C7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CYSTM1Q9H1C7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC11.97□□□□□ -0.49
CYSTM1Q9H1C7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CYSTM1Q9H1C7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms