Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB1BQ9H0U4 FBXW4P1-201ENST00000426721 2239 ntBASIC17.33■□□□□ 0.37
RAB1BQ9H0U4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB1BQ9H0U4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB1BQ9H0U4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.33■□□□□ 0.37
RAB1BQ9H0U4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.33■□□□□ 0.37
RAB1BQ9H0U4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
RAB1BQ9H0U4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.33■□□□□ 0.37
RAB1BQ9H0U4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.33■□□□□ 0.37
RAB1BQ9H0U4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 PNMA6B-201ENST00000538162 1200 ntBASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 C2orf69P4-201ENST00000565394 541 ntBASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.33■□□□□ 0.36
RAB1BQ9H0U4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 AC128676.1-201ENST00000454392 318 ntBASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 AC008687.6-201ENST00000596318 630 ntBASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 AL356652.1-201ENST00000615962 565 ntBASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RAB1BQ9H0U4 AC011484.1-201ENST00000377652 1995 ntBASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 PRORSD1P-201ENST00000295112 541 ntBASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 KRT17P3-201ENST00000420566 1262 ntBASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 AC066615.1-201ENST00000640911 628 ntBASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 Z98882.1-201ENST00000622160 2253 ntBASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
RAB1BQ9H0U4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms