Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.29■■□□□ 1
DDX47Q9H0S4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.29■■□□□ 1
DDX47Q9H0S4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.29■■□□□ 1
DDX47Q9H0S4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.29■■□□□ 1
DDX47Q9H0S4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.29■■□□□ 1
DDX47Q9H0S4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.29■■□□□ 1
DDX47Q9H0S4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.29■■□□□ 1
DDX47Q9H0S4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.29■■□□□ 1
DDX47Q9H0S4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.28■■□□□ 1
DDX47Q9H0S4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX47Q9H0S4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.28■■□□□ 1
DDX47Q9H0S4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX47Q9H0S4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
DDX47Q9H0S4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX47Q9H0S4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX47Q9H0S4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
DDX47Q9H0S4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX47Q9H0S4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX47Q9H0S4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX47Q9H0S4 MIR572-201ENST00000384983 95 ntBASIC21.28■■□□□ 1
DDX47Q9H0S4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX47Q9H0S4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.28■■□□□ 1
DDX47Q9H0S4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.28■■□□□ 1
DDX47Q9H0S4 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.28■■□□□ 1
DDX47Q9H0S4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX47Q9H0S4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DDX47Q9H0S4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX47Q9H0S4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.28■■□□□ 1
DDX47Q9H0S4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX47Q9H0S4 AC125437.2-201ENST00000625180 2167 ntBASIC21.27■■□□□ 1
DDX47Q9H0S4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX47Q9H0S4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX47Q9H0S4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.27■■□□□ 1
DDX47Q9H0S4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX47Q9H0S4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
DDX47Q9H0S4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.27■■□□□ 1
DDX47Q9H0S4 AC027682.1-201ENST00000562846 899 ntBASIC21.27■■□□□ 1
DDX47Q9H0S4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX47Q9H0S4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX47Q9H0S4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.27■■□□□ 1
DDX47Q9H0S4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX47Q9H0S4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.27■■□□□ 1
DDX47Q9H0S4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.27■■□□□ 1
DDX47Q9H0S4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.27■■□□□ 1
DDX47Q9H0S4 SMG8-203ENST00000578922 2178 ntBASIC21.27■■□□□ 1
DDX47Q9H0S4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
DDX47Q9H0S4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.27■□□□□ 0.99
DDX47Q9H0S4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
DDX47Q9H0S4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
DDX47Q9H0S4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.26■□□□□ 0.99
DDX47Q9H0S4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.26■□□□□ 0.99
DDX47Q9H0S4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX47Q9H0S4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.25■□□□□ 0.99
DDX47Q9H0S4 AC116562.4-201ENST00000641316 2276 ntBASIC21.25■□□□□ 0.99
DDX47Q9H0S4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX47Q9H0S4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
DDX47Q9H0S4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.25■□□□□ 0.99
DDX47Q9H0S4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.25■□□□□ 0.99
DDX47Q9H0S4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX47Q9H0S4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX47Q9H0S4 RARRES2P11-201ENST00000635158 484 ntBASIC21.25■□□□□ 0.99
DDX47Q9H0S4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.25■□□□□ 0.99
DDX47Q9H0S4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX47Q9H0S4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX47Q9H0S4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms