Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
POLR1EQ9GZS1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1EQ9GZS1 PGM5P4-201ENST00000421970 445 ntBASIC20.76■□□□□ 0.91
POLR1EQ9GZS1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR1EQ9GZS1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1EQ9GZS1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
POLR1EQ9GZS1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.76■□□□□ 0.91
POLR1EQ9GZS1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1EQ9GZS1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1EQ9GZS1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1EQ9GZS1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1EQ9GZS1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1EQ9GZS1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1EQ9GZS1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 MCRIP2P1-201ENST00000394346 511 ntBASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 AL512625.2-201ENST00000417533 625 ntBASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 AC087633.2-202ENST00000565166 1439 ntBASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1EQ9GZS1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1EQ9GZS1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.74■□□□□ 0.91
POLR1EQ9GZS1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
POLR1EQ9GZS1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.74■□□□□ 0.91
POLR1EQ9GZS1 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.74■□□□□ 0.91
POLR1EQ9GZS1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.74■□□□□ 0.91
POLR1EQ9GZS1 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.74■□□□□ 0.91
POLR1EQ9GZS1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.74■□□□□ 0.91
POLR1EQ9GZS1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.74■□□□□ 0.91
POLR1EQ9GZS1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1EQ9GZS1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 AC093787.1-201ENST00000450396 207 ntBASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 AC090192.1-201ENST00000517740 490 ntBASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 AF201337.1-201ENST00000520239 748 ntBASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1EQ9GZS1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 AC010980.2-201ENST00000587099 1412 ntBASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 AC105036.2-201ENST00000569468 176 ntBASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1EQ9GZS1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 AL121603.2-201ENST00000557373 2117 ntBASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 AL121832.2-201ENST00000610979 668 ntBASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1EQ9GZS1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
POLR1EQ9GZS1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms