Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMOQ99835 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.53■■□□□ 1.04
SMOQ99835 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMOQ99835 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SMOQ99835 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMOQ99835 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMOQ99835 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.53■■□□□ 1.04
SMOQ99835 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SMOQ99835 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.53■■□□□ 1.04
SMOQ99835 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
SMOQ99835 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
SMOQ99835 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMOQ99835 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.52■■□□□ 1.04
SMOQ99835 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMOQ99835 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.52■■□□□ 1.04
SMOQ99835 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMOQ99835 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMOQ99835 PGM5P4-201ENST00000421970 445 ntBASIC21.52■■□□□ 1.04
SMOQ99835 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMOQ99835 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMOQ99835 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.52■■□□□ 1.04
SMOQ99835 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMOQ99835 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMOQ99835 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.52■■□□□ 1.04
SMOQ99835 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMOQ99835 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMOQ99835 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMOQ99835 AC006128.1-201ENST00000624704 1661 ntBASIC21.52■■□□□ 1.04
SMOQ99835 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.52■■□□□ 1.03
SMOQ99835 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.52■■□□□ 1.03
SMOQ99835 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMOQ99835 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SMOQ99835 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 CD99P1-205ENST00000527459 561 ntBASIC21.51■■□□□ 1.03
SMOQ99835 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.51■■□□□ 1.03
SMOQ99835 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.51■■□□□ 1.03
SMOQ99835 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.51■■□□□ 1.03
SMOQ99835 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.51■■□□□ 1.03
SMOQ99835 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.51■■□□□ 1.03
SMOQ99835 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
SMOQ99835 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMOQ99835 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.51■■□□□ 1.03
SMOQ99835 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMOQ99835 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.5■■□□□ 1.03
SMOQ99835 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.5■■□□□ 1.03
SMOQ99835 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMOQ99835 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SMOQ99835 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMOQ99835 KRT8P36-201ENST00000489121 1440 ntBASIC21.5■■□□□ 1.03
SMOQ99835 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.5■■□□□ 1.03
SMOQ99835 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.5■■□□□ 1.03
SMOQ99835 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.5■■□□□ 1.03
SMOQ99835 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.5■■□□□ 1.03
SMOQ99835 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMOQ99835 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMOQ99835 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.5■■□□□ 1.03
SMOQ99835 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.5■■□□□ 1.03
SMOQ99835 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SMOQ99835 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMOQ99835 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SMOQ99835 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.49■■□□□ 1.03
SMOQ99835 AL121603.2-201ENST00000557373 2117 ntBASIC21.49■■□□□ 1.03
SMOQ99835 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMOQ99835 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SMOQ99835 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMOQ99835 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
SMOQ99835 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.49■■□□□ 1.03
SMOQ99835 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SMOQ99835 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMOQ99835 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMOQ99835 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMOQ99835 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.49■■□□□ 1.03
SMOQ99835 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMOQ99835 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMOQ99835 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMOQ99835 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMOQ99835 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.48■■□□□ 1.03
SMOQ99835 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMOQ99835 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMOQ99835 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMOQ99835 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMOQ99835 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMOQ99835 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMOQ99835 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMOQ99835 C2orf69P4-201ENST00000565394 541 ntBASIC21.48■■□□□ 1.03
SMOQ99835 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMOQ99835 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.48■■□□□ 1.03
SMOQ99835 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms