Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.9■□□□□ 0.62
TM9SF2Q99805 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF2Q99805 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF2Q99805 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TM9SF2Q99805 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TM9SF2Q99805 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.89■□□□□ 0.61
TM9SF2Q99805 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TM9SF2Q99805 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF2Q99805 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF2Q99805 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF2Q99805 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.89■□□□□ 0.61
TM9SF2Q99805 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
TM9SF2Q99805 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
TM9SF2Q99805 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF2Q99805 HLA-L-209ENST00000420110 1011 ntBASIC18.89■□□□□ 0.61
TM9SF2Q99805 AC007322.1-201ENST00000426983 750 ntBASIC18.89■□□□□ 0.61
TM9SF2Q99805 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF2Q99805 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.89■□□□□ 0.61
TM9SF2Q99805 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TM9SF2Q99805 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF2Q99805 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF2Q99805 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF2Q99805 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.89■□□□□ 0.61
TM9SF2Q99805 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF2Q99805 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF2Q99805 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.89■□□□□ 0.61
TM9SF2Q99805 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TM9SF2Q99805 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF2Q99805 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.89■□□□□ 0.61
TM9SF2Q99805 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF2Q99805 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF2Q99805 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF2Q99805 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF2Q99805 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TM9SF2Q99805 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TM9SF2Q99805 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF2Q99805 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF2Q99805 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.88■□□□□ 0.61
TM9SF2Q99805 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TM9SF2Q99805 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.88■□□□□ 0.61
TM9SF2Q99805 CROCCP5-201ENST00000436658 830 ntBASIC18.88■□□□□ 0.61
TM9SF2Q99805 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF2Q99805 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.88■□□□□ 0.61
TM9SF2Q99805 DUX4L16-201ENST00000555130 1264 ntBASIC18.88■□□□□ 0.61
TM9SF2Q99805 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.88■□□□□ 0.61
TM9SF2Q99805 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.88■□□□□ 0.61
TM9SF2Q99805 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.88■□□□□ 0.61
TM9SF2Q99805 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF2Q99805 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF2Q99805 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.88■□□□□ 0.61
TM9SF2Q99805 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF2Q99805 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF2Q99805 AC007952.6-201ENST00000573168 2673 ntBASIC18.87■□□□□ 0.61
TM9SF2Q99805 AC003957.1-201ENST00000625108 2673 ntBASIC18.87■□□□□ 0.61
TM9SF2Q99805 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF2Q99805 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF2Q99805 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF2Q99805 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF2Q99805 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF2Q99805 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF2Q99805 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF2Q99805 MIR663A-201ENST00000385250 93 ntBASIC18.87■□□□□ 0.61
TM9SF2Q99805 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF2Q99805 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF2Q99805 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.87■□□□□ 0.61
TM9SF2Q99805 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.86■□□□□ 0.61
TM9SF2Q99805 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
TM9SF2Q99805 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF2Q99805 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TM9SF2Q99805 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF2Q99805 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TM9SF2Q99805 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TM9SF2Q99805 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF2Q99805 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.86■□□□□ 0.61
TM9SF2Q99805 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TM9SF2Q99805 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF2Q99805 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF2Q99805 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF2Q99805 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF2Q99805 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.86■□□□□ 0.61
TM9SF2Q99805 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TM9SF2Q99805 POU5F1P4-201ENST00000413175 1085 ntBASIC18.86■□□□□ 0.61
TM9SF2Q99805 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.86■□□□□ 0.61
TM9SF2Q99805 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.86■□□□□ 0.61
TM9SF2Q99805 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.86■□□□□ 0.61
TM9SF2Q99805 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms