Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC13.64□□□□□ -0.23
LITAFQ99732 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC13.64□□□□□ -0.23
LITAFQ99732 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC13.64□□□□□ -0.23
LITAFQ99732 pRNA.6-201ENST00000610482 90 ntBASIC13.64□□□□□ -0.23
LITAFQ99732 pRNA.5-201ENST00000612139 90 ntBASIC13.64□□□□□ -0.23
LITAFQ99732 pRNA.11-201ENST00000618423 90 ntBASIC13.64□□□□□ -0.23
LITAFQ99732 pRNA.13-201ENST00000619112 90 ntBASIC13.64□□□□□ -0.23
LITAFQ99732 AC241377.3-202ENST00000626088 1088 ntBASIC13.64□□□□□ -0.23
LITAFQ99732 AC241585.3-202ENST00000628937 1088 ntBASIC13.64□□□□□ -0.23
LITAFQ99732 AC245100.8-202ENST00000629247 1058 ntBASIC13.64□□□□□ -0.23
LITAFQ99732 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LITAFQ99732 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LITAFQ99732 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LITAFQ99732 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LITAFQ99732 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LITAFQ99732 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LITAFQ99732 TMEM179-206ENST00000616017 1645 ntBASIC13.64□□□□□ -0.23
LITAFQ99732 AC007613.1-201ENST00000572811 2597 ntBASIC13.64□□□□□ -0.23
LITAFQ99732 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LITAFQ99732 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LITAFQ99732 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LITAFQ99732 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LITAFQ99732 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LITAFQ99732 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LITAFQ99732 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LITAFQ99732 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LITAFQ99732 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LITAFQ99732 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LITAFQ99732 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LITAFQ99732 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.63□□□□□ -0.23
LITAFQ99732 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LITAFQ99732 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
LITAFQ99732 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
LITAFQ99732 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LITAFQ99732 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LITAFQ99732 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LITAFQ99732 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.62□□□□□ -0.23
LITAFQ99732 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LITAFQ99732 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
LITAFQ99732 AL138781.2-201ENST00000617896 1843 ntBASIC13.62□□□□□ -0.23
LITAFQ99732 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LITAFQ99732 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LITAFQ99732 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LITAFQ99732 RARRES2P2-201ENST00000394842 485 ntBASIC13.62□□□□□ -0.23
LITAFQ99732 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
LITAFQ99732 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.62□□□□□ -0.23
LITAFQ99732 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LITAFQ99732 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC13.62□□□□□ -0.23
LITAFQ99732 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC13.62□□□□□ -0.23
LITAFQ99732 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.62□□□□□ -0.23
LITAFQ99732 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.62□□□□□ -0.23
LITAFQ99732 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LITAFQ99732 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LITAFQ99732 AL049812.1-201ENST00000432563 2267 ntBASIC13.62□□□□□ -0.23
LITAFQ99732 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LITAFQ99732 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LITAFQ99732 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LITAFQ99732 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LITAFQ99732 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LITAFQ99732 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LITAFQ99732 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LITAFQ99732 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LITAFQ99732 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LITAFQ99732 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LITAFQ99732 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LITAFQ99732 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.61□□□□□ -0.23
LITAFQ99732 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LITAFQ99732 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.61□□□□□ -0.23
LITAFQ99732 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LITAFQ99732 AC006455.2-201ENST00000429931 906 ntBASIC13.61□□□□□ -0.23
LITAFQ99732 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC13.61□□□□□ -0.23
LITAFQ99732 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LITAFQ99732 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.61□□□□□ -0.23
LITAFQ99732 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LITAFQ99732 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.61□□□□□ -0.23
LITAFQ99732 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
LITAFQ99732 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LITAFQ99732 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LITAFQ99732 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LITAFQ99732 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LITAFQ99732 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.61□□□□□ -0.23
LITAFQ99732 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LITAFQ99732 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.6□□□□□ -0.23
LITAFQ99732 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.6□□□□□ -0.23
LITAFQ99732 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC13.6□□□□□ -0.23
LITAFQ99732 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.6□□□□□ -0.23
LITAFQ99732 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
LITAFQ99732 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
LITAFQ99732 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 TK2-216ENST00000564917 1156 ntTSL 3 BASIC13.6□□□□□ -0.23
LITAFQ99732 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms