Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
NDNQ99608 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDNQ99608 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDNQ99608 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.47■□□□□ 0.87
NDNQ99608 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
NDNQ99608 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDNQ99608 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NDNQ99608 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NDNQ99608 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NDNQ99608 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
NDNQ99608 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDNQ99608 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDNQ99608 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDNQ99608 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDNQ99608 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NDNQ99608 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.46■□□□□ 0.87
NDNQ99608 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDNQ99608 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDNQ99608 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.46■□□□□ 0.87
NDNQ99608 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.46■□□□□ 0.87
NDNQ99608 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.46■□□□□ 0.87
NDNQ99608 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDNQ99608 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.45■□□□□ 0.86
NDNQ99608 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDNQ99608 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.45■□□□□ 0.86
NDNQ99608 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.45■□□□□ 0.86
NDNQ99608 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
NDNQ99608 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.45■□□□□ 0.86
NDNQ99608 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDNQ99608 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.45■□□□□ 0.86
NDNQ99608 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NDNQ99608 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDNQ99608 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDNQ99608 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NDNQ99608 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDNQ99608 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
NDNQ99608 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDNQ99608 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDNQ99608 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDNQ99608 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDNQ99608 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDNQ99608 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.44■□□□□ 0.86
NDNQ99608 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.44■□□□□ 0.86
NDNQ99608 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.44■□□□□ 0.86
NDNQ99608 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NDNQ99608 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.44■□□□□ 0.86
NDNQ99608 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.44■□□□□ 0.86
NDNQ99608 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NDNQ99608 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDNQ99608 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.44■□□□□ 0.86
NDNQ99608 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDNQ99608 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDNQ99608 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
NDNQ99608 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.44■□□□□ 0.86
NDNQ99608 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NDNQ99608 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
NDNQ99608 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NDNQ99608 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.43■□□□□ 0.86
NDNQ99608 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.43■□□□□ 0.86
NDNQ99608 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.43■□□□□ 0.86
NDNQ99608 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.43■□□□□ 0.86
NDNQ99608 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.43■□□□□ 0.86
NDNQ99608 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.43■□□□□ 0.86
NDNQ99608 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NDNQ99608 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NDNQ99608 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.43■□□□□ 0.86
NDNQ99608 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.42■□□□□ 0.86
NDNQ99608 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDNQ99608 PCDHAC2-203ENST00000615316 3011 ntBASIC20.42■□□□□ 0.86
NDNQ99608 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NDNQ99608 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.42■□□□□ 0.86
NDNQ99608 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDNQ99608 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
NDNQ99608 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDNQ99608 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NDNQ99608 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.42■□□□□ 0.86
NDNQ99608 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.42■□□□□ 0.86
NDNQ99608 AC020907.5-201ENST00000624372 1936 ntBASIC20.42■□□□□ 0.86
NDNQ99608 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NDNQ99608 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.42■□□□□ 0.86
NDNQ99608 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDNQ99608 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NDNQ99608 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NDNQ99608 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDNQ99608 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
NDNQ99608 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms