Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHOX2BQ99453 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHOX2BQ99453 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHOX2BQ99453 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHOX2BQ99453 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHOX2BQ99453 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHOX2BQ99453 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHOX2BQ99453 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHOX2BQ99453 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHOX2BQ99453 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 KRT18P48-201ENST00000434763 852 ntBASIC20.73■□□□□ 0.91
PHOX2BQ99453 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHOX2BQ99453 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.73■□□□□ 0.91
PHOX2BQ99453 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHOX2BQ99453 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHOX2BQ99453 AL024507.2-201ENST00000606070 2574 ntBASIC20.72■□□□□ 0.91
PHOX2BQ99453 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHOX2BQ99453 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHOX2BQ99453 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHOX2BQ99453 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.72■□□□□ 0.91
PHOX2BQ99453 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PHOX2BQ99453 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PHOX2BQ99453 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.72■□□□□ 0.91
PHOX2BQ99453 AL031963.3-201ENST00000606441 850 ntBASIC20.72■□□□□ 0.91
PHOX2BQ99453 FAM21FP-204ENST00000608637 956 ntBASIC20.72■□□□□ 0.91
PHOX2BQ99453 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.72■□□□□ 0.91
PHOX2BQ99453 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.72■□□□□ 0.91
PHOX2BQ99453 AC079598.2-202ENST00000546624 1451 ntBASIC20.72■□□□□ 0.91
PHOX2BQ99453 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHOX2BQ99453 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHOX2BQ99453 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PHOX2BQ99453 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.72■□□□□ 0.91
PHOX2BQ99453 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.71■□□□□ 0.91
PHOX2BQ99453 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.71■□□□□ 0.91
PHOX2BQ99453 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHOX2BQ99453 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHOX2BQ99453 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.71■□□□□ 0.91
PHOX2BQ99453 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PHOX2BQ99453 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHOX2BQ99453 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.71■□□□□ 0.91
PHOX2BQ99453 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
PHOX2BQ99453 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.71■□□□□ 0.91
PHOX2BQ99453 AC079089.2-201ENST00000531211 1277 ntBASIC20.71■□□□□ 0.91
PHOX2BQ99453 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.71■□□□□ 0.91
PHOX2BQ99453 AP006587.3-201ENST00000525742 1516 ntBASIC20.71■□□□□ 0.91
PHOX2BQ99453 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PHOX2BQ99453 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHOX2BQ99453 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
PHOX2BQ99453 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHOX2BQ99453 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHOX2BQ99453 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHOX2BQ99453 MCRIP2P1-201ENST00000394346 511 ntBASIC20.7■□□□□ 0.9
PHOX2BQ99453 DUSP5P1-201ENST00000441325 1139 ntBASIC20.7■□□□□ 0.9
PHOX2BQ99453 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHOX2BQ99453 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.7■□□□□ 0.9
PHOX2BQ99453 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.7■□□□□ 0.9
PHOX2BQ99453 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.7■□□□□ 0.9
PHOX2BQ99453 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.7■□□□□ 0.9
PHOX2BQ99453 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.7■□□□□ 0.9
PHOX2BQ99453 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.7■□□□□ 0.9
PHOX2BQ99453 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHOX2BQ99453 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHOX2BQ99453 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHOX2BQ99453 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHOX2BQ99453 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PHOX2BQ99453 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.69■□□□□ 0.9
PHOX2BQ99453 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
PHOX2BQ99453 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHOX2BQ99453 KRT18P68-201ENST00000392293 1000 ntBASIC20.69■□□□□ 0.9
PHOX2BQ99453 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.69■□□□□ 0.9
PHOX2BQ99453 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHOX2BQ99453 RBM17P1-201ENST00000453646 1190 ntBASIC20.69■□□□□ 0.9
PHOX2BQ99453 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.69■□□□□ 0.9
PHOX2BQ99453 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.69■□□□□ 0.9
PHOX2BQ99453 AP000525.1-201ENST00000608286 694 ntBASIC20.69■□□□□ 0.9
PHOX2BQ99453 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.69■□□□□ 0.9
PHOX2BQ99453 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHOX2BQ99453 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.69■□□□□ 0.9
PHOX2BQ99453 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHOX2BQ99453 AC087633.2-202ENST00000565166 1439 ntBASIC20.69■□□□□ 0.9
PHOX2BQ99453 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.69■□□□□ 0.9
PHOX2BQ99453 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PHOX2BQ99453 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PHOX2BQ99453 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms