Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.33■■□□□ 1
NECTIN4Q96NY8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.32■■□□□ 1
NECTIN4Q96NY8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.32■■□□□ 1
NECTIN4Q96NY8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.32■■□□□ 1
NECTIN4Q96NY8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.32■■□□□ 1
NECTIN4Q96NY8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
NECTIN4Q96NY8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.32■■□□□ 1
NECTIN4Q96NY8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.32■■□□□ 1
NECTIN4Q96NY8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.32■■□□□ 1
NECTIN4Q96NY8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NECTIN4Q96NY8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
NECTIN4Q96NY8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
NECTIN4Q96NY8 AL445228.2-201ENST00000605589 952 ntBASIC21.32■■□□□ 1
NECTIN4Q96NY8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
NECTIN4Q96NY8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NECTIN4Q96NY8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NECTIN4Q96NY8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.31■■□□□ 1
NECTIN4Q96NY8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.31■■□□□ 1
NECTIN4Q96NY8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.31■■□□□ 1
NECTIN4Q96NY8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
NECTIN4Q96NY8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
NECTIN4Q96NY8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
NECTIN4Q96NY8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NECTIN4Q96NY8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.31■■□□□ 1
NECTIN4Q96NY8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.31■■□□□ 1
NECTIN4Q96NY8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.31■■□□□ 1
NECTIN4Q96NY8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.31■■□□□ 1
NECTIN4Q96NY8 AL353708.3-201ENST00000610272 989 ntBASIC21.31■■□□□ 1
NECTIN4Q96NY8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NECTIN4Q96NY8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NECTIN4Q96NY8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.31■■□□□ 1
NECTIN4Q96NY8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.31■■□□□ 1
NECTIN4Q96NY8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NECTIN4Q96NY8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.3■■□□□ 1
NECTIN4Q96NY8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NECTIN4Q96NY8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.3■■□□□ 1
NECTIN4Q96NY8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.3■■□□□ 1
NECTIN4Q96NY8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
NECTIN4Q96NY8 MMP23A-201ENST00000234610 1017 ntBASIC21.3■■□□□ 1
NECTIN4Q96NY8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
NECTIN4Q96NY8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.3■■□□□ 1
NECTIN4Q96NY8 AL355355.2-201ENST00000442321 338 ntBASIC21.3■■□□□ 1
NECTIN4Q96NY8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.3■■□□□ 1
NECTIN4Q96NY8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.3■■□□□ 1
NECTIN4Q96NY8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.3■■□□□ 1
NECTIN4Q96NY8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.3■■□□□ 1
NECTIN4Q96NY8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NECTIN4Q96NY8 AP003071.4-201ENST00000562276 1284 ntBASIC21.3■■□□□ 1
NECTIN4Q96NY8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.3■■□□□ 1
NECTIN4Q96NY8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.29■■□□□ 1
NECTIN4Q96NY8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.29■■□□□ 1
NECTIN4Q96NY8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NECTIN4Q96NY8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.29■■□□□ 1
NECTIN4Q96NY8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NECTIN4Q96NY8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
NECTIN4Q96NY8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NECTIN4Q96NY8 AL353807.1-201ENST00000427475 662 ntBASIC21.29■■□□□ 1
NECTIN4Q96NY8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.29■■□□□ 1
NECTIN4Q96NY8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.29■■□□□ 1
NECTIN4Q96NY8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.29■■□□□ 1
NECTIN4Q96NY8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.29■■□□□ 1
NECTIN4Q96NY8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.29■■□□□ 1
NECTIN4Q96NY8 AL356652.1-201ENST00000615962 565 ntBASIC21.29■■□□□ 1
NECTIN4Q96NY8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.29■■□□□ 1
NECTIN4Q96NY8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NECTIN4Q96NY8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
NECTIN4Q96NY8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.29■■□□□ 1
NECTIN4Q96NY8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NECTIN4Q96NY8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.28■■□□□ 1
NECTIN4Q96NY8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.28■■□□□ 1
NECTIN4Q96NY8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NECTIN4Q96NY8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NECTIN4Q96NY8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NECTIN4Q96NY8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.28■■□□□ 1
NECTIN4Q96NY8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.28■■□□□ 1
NECTIN4Q96NY8 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.28■■□□□ 1
NECTIN4Q96NY8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NECTIN4Q96NY8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.28■■□□□ 1
NECTIN4Q96NY8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.28■■□□□ 1
NECTIN4Q96NY8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
NECTIN4Q96NY8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
NECTIN4Q96NY8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
NECTIN4Q96NY8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.28■■□□□ 1
NECTIN4Q96NY8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NECTIN4Q96NY8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NECTIN4Q96NY8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NECTIN4Q96NY8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.28■■□□□ 1
NECTIN4Q96NY8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.27■■□□□ 1
NECTIN4Q96NY8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.27■■□□□ 1
NECTIN4Q96NY8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
NECTIN4Q96NY8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NECTIN4Q96NY8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NECTIN4Q96NY8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.27■■□□□ 1
NECTIN4Q96NY8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.27■■□□□ 1
NECTIN4Q96NY8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NECTIN4Q96NY8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NECTIN4Q96NY8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.27■■□□□ 1
NECTIN4Q96NY8 RN7SL850P-201ENST00000579959 291 ntBASIC21.27■■□□□ 1
NECTIN4Q96NY8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.27■■□□□ 1
NECTIN4Q96NY8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms