Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM5Q96HC4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 MFSD11-216ENST00000590393 1141 ntBASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM5Q96HC4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDLIM5Q96HC4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDLIM5Q96HC4 AL512408.1-201ENST00000569378 2000 ntBASIC20.02■□□□□ 0.79
PDLIM5Q96HC4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 MIR5787-201ENST00000611784 55 ntBASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM5Q96HC4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PDLIM5Q96HC4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20■□□□□ 0.79
PDLIM5Q96HC4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20■□□□□ 0.79
PDLIM5Q96HC4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20■□□□□ 0.79
PDLIM5Q96HC4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20■□□□□ 0.79
PDLIM5Q96HC4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
PDLIM5Q96HC4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM5Q96HC4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PDLIM5Q96HC4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 AC016769.1-201ENST00000409132 1010 ntBASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 AL162430.1-201ENST00000480705 870 ntBASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 DUX4L16-201ENST00000555130 1264 ntBASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms