Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM11Q96F44 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM11Q96F44 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM11Q96F44 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TRIM11Q96F44 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TRIM11Q96F44 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.63■■□□□ 1.05
TRIM11Q96F44 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 NTF6G-201ENST00000591094 616 ntBASIC21.63■■□□□ 1.05
TRIM11Q96F44 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.63■■□□□ 1.05
TRIM11Q96F44 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM11Q96F44 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM11Q96F44 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM11Q96F44 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TRIM11Q96F44 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM11Q96F44 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM11Q96F44 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM11Q96F44 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM11Q96F44 AL162377.1-201ENST00000618844 1793 ntBASIC21.62■■□□□ 1.05
TRIM11Q96F44 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM11Q96F44 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
TRIM11Q96F44 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TRIM11Q96F44 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
TRIM11Q96F44 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
TRIM11Q96F44 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM11Q96F44 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.62■■□□□ 1.05
TRIM11Q96F44 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.62■■□□□ 1.05
TRIM11Q96F44 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM11Q96F44 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.62■■□□□ 1.05
TRIM11Q96F44 FAM21FP-204ENST00000608637 956 ntBASIC21.62■■□□□ 1.05
TRIM11Q96F44 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TRIM11Q96F44 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM11Q96F44 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TRIM11Q96F44 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM11Q96F44 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM11Q96F44 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM11Q96F44 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
TRIM11Q96F44 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TRIM11Q96F44 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM11Q96F44 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM11Q96F44 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM11Q96F44 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.61■■□□□ 1.05
TRIM11Q96F44 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM11Q96F44 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM11Q96F44 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TRIM11Q96F44 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
TRIM11Q96F44 MIR6821-201ENST00000617625 74 ntBASIC21.61■■□□□ 1.05
TRIM11Q96F44 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM11Q96F44 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM11Q96F44 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM11Q96F44 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TRIM11Q96F44 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TRIM11Q96F44 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM11Q96F44 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM11Q96F44 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM11Q96F44 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM11Q96F44 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TRIM11Q96F44 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.6■■□□□ 1.05
TRIM11Q96F44 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM11Q96F44 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TRIM11Q96F44 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM11Q96F44 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM11Q96F44 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.6■■□□□ 1.05
TRIM11Q96F44 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM11Q96F44 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TRIM11Q96F44 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM11Q96F44 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM11Q96F44 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TRIM11Q96F44 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TRIM11Q96F44 SLC25A24-204ENST00000569674 2357 ntBASIC21.6■■□□□ 1.05
TRIM11Q96F44 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.6■■□□□ 1.05
TRIM11Q96F44 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM11Q96F44 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM11Q96F44 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM11Q96F44 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM11Q96F44 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.59■■□□□ 1.05
TRIM11Q96F44 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM11Q96F44 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TRIM11Q96F44 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM11Q96F44 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM11Q96F44 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM11Q96F44 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM11Q96F44 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TRIM11Q96F44 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM11Q96F44 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM11Q96F44 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM11Q96F44 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM11Q96F44 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms