Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.91■□□□□ 0.46
SPTSSAQ969W0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.91■□□□□ 0.46
SPTSSAQ969W0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.91■□□□□ 0.46
SPTSSAQ969W0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SPTSSAQ969W0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SPTSSAQ969W0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SPTSSAQ969W0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPTSSAQ969W0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.91■□□□□ 0.46
SPTSSAQ969W0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPTSSAQ969W0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPTSSAQ969W0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.91■□□□□ 0.46
SPTSSAQ969W0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPTSSAQ969W0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 AC007322.3-201ENST00000426526 701 ntBASIC17.9■□□□□ 0.46
SPTSSAQ969W0 CDV3P1-201ENST00000471403 739 ntBASIC17.9■□□□□ 0.46
SPTSSAQ969W0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 MYCNOS-205ENST00000641950 531 ntBASIC17.9■□□□□ 0.46
SPTSSAQ969W0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPTSSAQ969W0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.89■□□□□ 0.46
SPTSSAQ969W0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.89■□□□□ 0.46
SPTSSAQ969W0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.89■□□□□ 0.46
SPTSSAQ969W0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.46
SPTSSAQ969W0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
SPTSSAQ969W0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 AC073314.1-201ENST00000568729 2216 ntBASIC17.89■□□□□ 0.45
SPTSSAQ969W0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 AC091799.1-201ENST00000422823 811 ntBASIC17.89■□□□□ 0.45
SPTSSAQ969W0 KRT18P11-201ENST00000435214 1283 ntBASIC17.89■□□□□ 0.45
SPTSSAQ969W0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 AC087623.3-201ENST00000607047 1098 ntBASIC17.89■□□□□ 0.45
SPTSSAQ969W0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.89■□□□□ 0.45
SPTSSAQ969W0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 KRT18P61-201ENST00000585825 1298 ntBASIC17.88■□□□□ 0.45
SPTSSAQ969W0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPTSSAQ969W0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 AC020907.5-201ENST00000624372 1936 ntBASIC17.87■□□□□ 0.45
SPTSSAQ969W0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.87■□□□□ 0.45
SPTSSAQ969W0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms