Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SMARCC1Q92922 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMARCC1Q92922 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.38■■□□□ 1.81
SMARCC1Q92922 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMARCC1Q92922 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMARCC1Q92922 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC26.37■■□□□ 1.81
SMARCC1Q92922 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC26.37■■□□□ 1.81
SMARCC1Q92922 AC026471.5-201ENST00000615068 467 ntBASIC26.37■■□□□ 1.81
SMARCC1Q92922 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
SMARCC1Q92922 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMARCC1Q92922 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMARCC1Q92922 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMARCC1Q92922 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMARCC1Q92922 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SMARCC1Q92922 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SMARCC1Q92922 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SMARCC1Q92922 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMARCC1Q92922 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SMARCC1Q92922 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.36■■□□□ 1.81
SMARCC1Q92922 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC26.36■■□□□ 1.81
SMARCC1Q92922 AL353708.3-201ENST00000610272 989 ntBASIC26.36■■□□□ 1.81
SMARCC1Q92922 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMARCC1Q92922 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMARCC1Q92922 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.36■■□□□ 1.81
SMARCC1Q92922 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMARCC1Q92922 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SMARCC1Q92922 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC1Q92922 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.35■■□□□ 1.81
SMARCC1Q92922 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC1Q92922 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC1Q92922 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SMARCC1Q92922 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
SMARCC1Q92922 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC26.35■■□□□ 1.81
SMARCC1Q92922 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
SMARCC1Q92922 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC26.35■■□□□ 1.81
SMARCC1Q92922 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC26.35■■□□□ 1.81
SMARCC1Q92922 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.35■■□□□ 1.81
SMARCC1Q92922 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SMARCC1Q92922 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC1Q92922 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC1Q92922 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMARCC1Q92922 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
SMARCC1Q92922 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMARCC1Q92922 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SMARCC1Q92922 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SMARCC1Q92922 SAPCD2P4-201ENST00000424595 1171 ntBASIC26.34■■□□□ 1.81
SMARCC1Q92922 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMARCC1Q92922 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
SMARCC1Q92922 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SMARCC1Q92922 CD177P1-201ENST00000606252 935 ntBASIC26.34■■□□□ 1.81
SMARCC1Q92922 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SMARCC1Q92922 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
SMARCC1Q92922 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMARCC1Q92922 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC1Q92922 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC1Q92922 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC1Q92922 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC1Q92922 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC26.33■■□□□ 1.81
SMARCC1Q92922 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC26.33■■□□□ 1.81
SMARCC1Q92922 AP003071.4-201ENST00000562276 1284 ntBASIC26.33■■□□□ 1.81
SMARCC1Q92922 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC1Q92922 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC1Q92922 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC1Q92922 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.33■■□□□ 1.81
SMARCC1Q92922 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC1Q92922 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC1Q92922 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC1Q92922 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMARCC1Q92922 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC1Q92922 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC1Q92922 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC1Q92922 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC1Q92922 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC1Q92922 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC26.32■■□□□ 1.8
SMARCC1Q92922 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.32■■□□□ 1.8
SMARCC1Q92922 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC1Q92922 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC1Q92922 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC1Q92922 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMARCC1Q92922 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCC1Q92922 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCC1Q92922 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCC1Q92922 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
SMARCC1Q92922 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
SMARCC1Q92922 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC26.31■■□□□ 1.8
SMARCC1Q92922 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC26.31■■□□□ 1.8
SMARCC1Q92922 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCC1Q92922 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC26.31■■□□□ 1.8
SMARCC1Q92922 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC26.31■■□□□ 1.8
SMARCC1Q92922 GRAP-204ENST00000573099 846 ntTSL 3 BASIC26.31■■□□□ 1.8
SMARCC1Q92922 AL121829.2-201ENST00000620908 328 ntBASIC26.31■■□□□ 1.8
SMARCC1Q92922 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.31■■□□□ 1.8
SMARCC1Q92922 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCC1Q92922 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCC1Q92922 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.31■■□□□ 1.8
SMARCC1Q92922 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMARCC1Q92922 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCC1Q92922 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCC1Q92922 C1orf229-201ENST00000623686 2258 ntBASIC26.3■■□□□ 1.8
SMARCC1Q92922 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms