Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC008403.3-201ENST00000598924 454 ntBASIC21.28■■□□□ 1
SH3RF2Q8TEC5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.28■■□□□ 1
SH3RF2Q8TEC5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3RF2Q8TEC5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.28■■□□□ 1
SH3RF2Q8TEC5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SH3RF2Q8TEC5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.28■■□□□ 1
SH3RF2Q8TEC5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3RF2Q8TEC5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
SH3RF2Q8TEC5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SH3RF2Q8TEC5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.27■■□□□ 1
SH3RF2Q8TEC5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3RF2Q8TEC5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.27■■□□□ 1
SH3RF2Q8TEC5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3RF2Q8TEC5 AL158047.1-201ENST00000445918 881 ntBASIC21.27■■□□□ 1
SH3RF2Q8TEC5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.27■■□□□ 1
SH3RF2Q8TEC5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.27■■□□□ 1
SH3RF2Q8TEC5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.27■■□□□ 1
SH3RF2Q8TEC5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SH3RF2Q8TEC5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SH3RF2Q8TEC5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
SH3RF2Q8TEC5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.27■□□□□ 0.99
SH3RF2Q8TEC5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 AC142381.4-202ENST00000563973 229 ntBASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 AC087633.2-202ENST00000565166 1439 ntBASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF2Q8TEC5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 UNC93B4-201ENST00000505679 747 ntBASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
SH3RF2Q8TEC5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 C2orf69P4-201ENST00000565394 541 ntBASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3RF2Q8TEC5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 AC244015.2-201ENST00000616358 1861 ntBASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3RF2Q8TEC5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3RF2Q8TEC5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms