Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 KRT18P61-201ENST00000585825 1298 ntBASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 MIR6821-201ENST00000617625 74 ntBASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRAF3IP1Q8TDR0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 UBE2DNL-204ENST00000602536 740 ntBASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 AC019069.1-201ENST00000610008 1333 ntBASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
TRAF3IP1Q8TDR0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 AC243732.1-201ENST00000612648 864 ntBASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 AC027702.1-201ENST00000563810 1770 ntBASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 RBM17P2-201ENST00000616397 1405 ntBASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP1Q8TDR0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
TRAF3IP1Q8TDR0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRAF3IP1Q8TDR0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRAF3IP1Q8TDR0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRAF3IP1Q8TDR0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.27■□□□□ 0.99
TRAF3IP1Q8TDR0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 AC087623.3-201ENST00000607047 1098 ntBASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TRAF3IP1Q8TDR0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 MYCNOS-205ENST00000641950 531 ntBASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms