Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCHCR1Q8TD31 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CCHCR1Q8TD31 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCHCR1Q8TD31 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 NTF6G-201ENST00000591094 616 ntBASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CCHCR1Q8TD31 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCHCR1Q8TD31 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCHCR1Q8TD31 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 AL162377.1-201ENST00000618844 1793 ntBASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCHCR1Q8TD31 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 AL162430.1-201ENST00000480705 870 ntBASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCHCR1Q8TD31 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.21■□□□□ 0.99
CCHCR1Q8TD31 KRT19P1-201ENST00000405746 1186 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms