Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.73■□□□□ 0.59
CHD6Q8TD26 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHD6Q8TD26 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.73■□□□□ 0.59
CHD6Q8TD26 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.73■□□□□ 0.59
CHD6Q8TD26 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.73■□□□□ 0.59
CHD6Q8TD26 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHD6Q8TD26 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.73■□□□□ 0.59
CHD6Q8TD26 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CHD6Q8TD26 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.73■□□□□ 0.59
CHD6Q8TD26 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CHD6Q8TD26 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.73■□□□□ 0.59
CHD6Q8TD26 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.73■□□□□ 0.59
CHD6Q8TD26 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.73■□□□□ 0.59
CHD6Q8TD26 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHD6Q8TD26 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.72■□□□□ 0.59
CHD6Q8TD26 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.72■□□□□ 0.59
CHD6Q8TD26 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.72■□□□□ 0.59
CHD6Q8TD26 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.72■□□□□ 0.59
CHD6Q8TD26 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD6Q8TD26 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD6Q8TD26 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD6Q8TD26 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHD6Q8TD26 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD6Q8TD26 AP002982.1-201ENST00000492365 877 ntBASIC18.72■□□□□ 0.59
CHD6Q8TD26 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.72■□□□□ 0.59
CHD6Q8TD26 AC026271.3-201ENST00000571884 352 ntBASIC18.72■□□□□ 0.59
CHD6Q8TD26 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD6Q8TD26 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHD6Q8TD26 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD6Q8TD26 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD6Q8TD26 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHD6Q8TD26 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD6Q8TD26 AC104692.2-201ENST00000603054 253 ntBASIC18.71■□□□□ 0.59
CHD6Q8TD26 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CHD6Q8TD26 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD6Q8TD26 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD6Q8TD26 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD6Q8TD26 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD6Q8TD26 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.71■□□□□ 0.59
CHD6Q8TD26 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD6Q8TD26 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD6Q8TD26 AL138966.2-201ENST00000621997 464 ntBASIC18.71■□□□□ 0.59
CHD6Q8TD26 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD6Q8TD26 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD6Q8TD26 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD6Q8TD26 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD6Q8TD26 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD6Q8TD26 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHD6Q8TD26 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD6Q8TD26 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.7■□□□□ 0.58
CHD6Q8TD26 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.7■□□□□ 0.58
CHD6Q8TD26 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.7■□□□□ 0.58
CHD6Q8TD26 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHD6Q8TD26 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD6Q8TD26 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CHD6Q8TD26 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD6Q8TD26 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD6Q8TD26 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.7■□□□□ 0.58
CHD6Q8TD26 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.7■□□□□ 0.58
CHD6Q8TD26 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.7■□□□□ 0.58
CHD6Q8TD26 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.7■□□□□ 0.58
CHD6Q8TD26 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHD6Q8TD26 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD6Q8TD26 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD6Q8TD26 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD6Q8TD26 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD6Q8TD26 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD6Q8TD26 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.69■□□□□ 0.58
CHD6Q8TD26 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD6Q8TD26 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD6Q8TD26 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CHD6Q8TD26 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.69■□□□□ 0.58
CHD6Q8TD26 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD6Q8TD26 CDV3P1-201ENST00000471403 739 ntBASIC18.69■□□□□ 0.58
CHD6Q8TD26 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.69■□□□□ 0.58
CHD6Q8TD26 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD6Q8TD26 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.69■□□□□ 0.58
CHD6Q8TD26 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD6Q8TD26 KSR1P1-201ENST00000446298 240 ntBASIC18.69■□□□□ 0.58
CHD6Q8TD26 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD6Q8TD26 MIR3652-201ENST00000579335 131 ntBASIC18.69■□□□□ 0.58
CHD6Q8TD26 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD6Q8TD26 MESTP1-201ENST00000404287 994 ntBASIC18.68■□□□□ 0.58
CHD6Q8TD26 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms