Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.15■□□□□ 0.66
NUP43Q8NFH3 MIR2861-201ENST00000636310 90 ntBASIC19.15■□□□□ 0.66
NUP43Q8NFH3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 AC020907.5-201ENST00000624372 1936 ntBASIC19.15■□□□□ 0.66
NUP43Q8NFH3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 AL121603.2-201ENST00000557373 2117 ntBASIC19.15■□□□□ 0.66
NUP43Q8NFH3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUP43Q8NFH3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NUP43Q8NFH3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
NUP43Q8NFH3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 AL162430.1-201ENST00000480705 870 ntBASIC19.14■□□□□ 0.65
NUP43Q8NFH3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NUP43Q8NFH3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.13■□□□□ 0.65
NUP43Q8NFH3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NUP43Q8NFH3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.12■□□□□ 0.65
NUP43Q8NFH3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 AC073130.3-201ENST00000624389 2278 ntBASIC19.12■□□□□ 0.65
NUP43Q8NFH3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.12■□□□□ 0.65
NUP43Q8NFH3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.11■□□□□ 0.65
NUP43Q8NFH3 AL591742.1-201ENST00000604433 565 ntBASIC19.11■□□□□ 0.65
NUP43Q8NFH3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms