Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 GABARAPL3-202ENST00000624044 1851 ntBASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 LINC01521-201ENST00000504184 1943 ntBASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 AL121603.2-201ENST00000557373 2117 ntBASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 LINC01006-201ENST00000333319 2292 ntBASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM35BQ8NCS4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 AC231657.2-201ENST00000624556 255 ntBASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM35BQ8NCS4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 AC068338.2-201ENST00000563278 1430 ntBASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 AC016405.3-201ENST00000607710 860 ntBASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 AC092437.1-201ENST00000624794 1048 ntBASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM35BQ8NCS4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 IKBKGP1-201ENST00000612193 1073 ntBASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 AC020907.5-201ENST00000624372 1936 ntBASIC21.65■■□□□ 1.06
TMEM35BQ8NCS4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.64■■□□□ 1.06
TMEM35BQ8NCS4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
TMEM35BQ8NCS4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.64■■□□□ 1.06
TMEM35BQ8NCS4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TMEM35BQ8NCS4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TMEM35BQ8NCS4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.64■■□□□ 1.05
TMEM35BQ8NCS4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM35BQ8NCS4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM35BQ8NCS4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM35BQ8NCS4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
TMEM35BQ8NCS4 AC007322.1-201ENST00000426983 750 ntBASIC21.64■■□□□ 1.05
TMEM35BQ8NCS4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
TMEM35BQ8NCS4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.64■■□□□ 1.05
TMEM35BQ8NCS4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
TMEM35BQ8NCS4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM35BQ8NCS4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.64■■□□□ 1.05
TMEM35BQ8NCS4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms