Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 KRT18P68-201ENST00000392293 1000 ntBASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 AL355802.2-201ENST00000402069 882 ntBASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 MIR2861-201ENST00000636310 90 ntBASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 AC142086.2-201ENST00000569753 217 ntBASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RASGEF1AQ8N9B8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RASGEF1AQ8N9B8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 AC098934.4-201ENST00000564127 592 ntBASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RASGEF1AQ8N9B8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.14■□□□□ 0.82
RASGEF1AQ8N9B8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RASGEF1AQ8N9B8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.14■□□□□ 0.81
RASGEF1AQ8N9B8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RASGEF1AQ8N9B8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RASGEF1AQ8N9B8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RASGEF1AQ8N9B8 LSM12P1-201ENST00000411836 588 ntBASIC20.14■□□□□ 0.81
RASGEF1AQ8N9B8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RASGEF1AQ8N9B8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.14■□□□□ 0.81
RASGEF1AQ8N9B8 AC092118.2-201ENST00000613495 667 ntBASIC20.14■□□□□ 0.81
RASGEF1AQ8N9B8 AL356652.1-201ENST00000615962 565 ntBASIC20.14■□□□□ 0.81
RASGEF1AQ8N9B8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RASGEF1AQ8N9B8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RASGEF1AQ8N9B8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RASGEF1AQ8N9B8 FP700111.2-201ENST00000619190 1892 ntBASIC20.13■□□□□ 0.81
RASGEF1AQ8N9B8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RASGEF1AQ8N9B8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RASGEF1AQ8N9B8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.13■□□□□ 0.81
RASGEF1AQ8N9B8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.13■□□□□ 0.81
RASGEF1AQ8N9B8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RASGEF1AQ8N9B8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RASGEF1AQ8N9B8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms