Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNEP1R1Q8N9A8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNEP1R1Q8N9A8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNEP1R1Q8N9A8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNEP1R1Q8N9A8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNEP1R1Q8N9A8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNEP1R1Q8N9A8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.18■□□□□ 0.5
CNEP1R1Q8N9A8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNEP1R1Q8N9A8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.18■□□□□ 0.5
CNEP1R1Q8N9A8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.18■□□□□ 0.5
CNEP1R1Q8N9A8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNEP1R1Q8N9A8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNEP1R1Q8N9A8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 KRT18P29-201ENST00000397031 1267 ntBASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 PGM5P4-201ENST00000421970 445 ntBASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 AC105020.6-201ENST00000621523 1217 ntBASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNEP1R1Q8N9A8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 ESRRAP1-201ENST00000400596 1257 ntBASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.16■□□□□ 0.5
CNEP1R1Q8N9A8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 AL024507.2-201ENST00000606070 2574 ntBASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 AC087633.2-202ENST00000565166 1439 ntBASIC18.15■□□□□ 0.5
CNEP1R1Q8N9A8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.14■□□□□ 0.5
CNEP1R1Q8N9A8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNEP1R1Q8N9A8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNEP1R1Q8N9A8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNEP1R1Q8N9A8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CNEP1R1Q8N9A8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNEP1R1Q8N9A8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.14■□□□□ 0.49
CNEP1R1Q8N9A8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.14■□□□□ 0.49
CNEP1R1Q8N9A8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CNEP1R1Q8N9A8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNEP1R1Q8N9A8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms