Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 AL356652.1-201ENST00000615962 565 ntBASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 AC006128.1-201ENST00000624704 1661 ntBASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 KRT8P36-201ENST00000489121 1440 ntBASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ARHGEF39Q8N4T4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 PGM5P4-201ENST00000421970 445 ntBASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 AC097658.1-201ENST00000475555 843 ntBASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 KRT18P6-201ENST00000555540 1265 ntBASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ARHGEF39Q8N4T4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 CLDN5-201ENST00000403084 2357 ntBASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.34■□□□□ 0.69
ARHGEF39Q8N4T4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ARHGEF39Q8N4T4 AL121603.2-201ENST00000557373 2117 ntBASIC19.33■□□□□ 0.69
ARHGEF39Q8N4T4 AL137060.1-201ENST00000618151 2648 ntBASIC19.33■□□□□ 0.69
ARHGEF39Q8N4T4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ARHGEF39Q8N4T4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms