Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 AC010331.1-201ENST00000611423 582 ntBASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 AC120498.8-201ENST00000614275 531 ntBASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 AC012676.1-201ENST00000574705 1949 ntBASIC20.41■□□□□ 0.86
TMEFF1Q8IYR6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 AL049637.2-201ENST00000641778 930 ntBASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TMEFF1Q8IYR6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
TMEFF1Q8IYR6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMEFF1Q8IYR6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMEFF1Q8IYR6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMEFF1Q8IYR6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
TMEFF1Q8IYR6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMEFF1Q8IYR6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
TMEFF1Q8IYR6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMEFF1Q8IYR6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 AC087633.2-202ENST00000565166 1439 ntBASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 AC133681.1-201ENST00000465482 601 ntBASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 EP400NL-214ENST00000641289 2402 ntBASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TMEFF1Q8IYR6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 KRASP1-201ENST00000407852 552 ntBASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEFF1Q8IYR6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 AC005829.2-201ENST00000571422 1056 ntBASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 AP001412.1-201ENST00000608405 714 ntBASIC20.37■□□□□ 0.85
TMEFF1Q8IYR6 AC110285.5-201ENST00000611501 352 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms