Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 MIR5787-201ENST00000611784 55 ntBASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE9Q8IYJ1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 AC010536.3-201ENST00000620306 533 ntBASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.21■□□□□ 0.83
CPNE9Q8IYJ1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 AC016769.1-201ENST00000409132 1010 ntBASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 AC007322.3-201ENST00000426526 701 ntBASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 GABARAPL3-202ENST00000624044 1851 ntBASIC20.2■□□□□ 0.82
CPNE9Q8IYJ1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 KRT18P11-201ENST00000435214 1283 ntBASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 TERF1P5-201ENST00000477545 1207 ntBASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CPNE9Q8IYJ1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE9Q8IYJ1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms