Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 AC027702.1-201ENST00000563810 1770 ntBASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 PGM5P4-201ENST00000421970 445 ntBASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 C2orf69P4-201ENST00000565394 541 ntBASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 ITM2C-210ENST00000620962 501 ntBASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.83■■□□□ 1.25
CCDC60Q8IWA6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.24
CCDC60Q8IWA6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.83■■□□□ 1.24
CCDC60Q8IWA6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC60Q8IWA6 AC121338.2-201ENST00000622535 1744 ntBASIC22.82■■□□□ 1.24
CCDC60Q8IWA6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.82■■□□□ 1.24
CCDC60Q8IWA6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
CCDC60Q8IWA6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.82■■□□□ 1.24
CCDC60Q8IWA6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC60Q8IWA6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
CCDC60Q8IWA6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.82■■□□□ 1.24
CCDC60Q8IWA6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC60Q8IWA6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC60Q8IWA6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC60Q8IWA6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC60Q8IWA6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.81■■□□□ 1.24
CCDC60Q8IWA6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC60Q8IWA6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC60Q8IWA6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.81■■□□□ 1.24
CCDC60Q8IWA6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.81■■□□□ 1.24
CCDC60Q8IWA6 PNMA6B-201ENST00000538162 1200 ntBASIC22.81■■□□□ 1.24
CCDC60Q8IWA6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC60Q8IWA6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC60Q8IWA6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC60Q8IWA6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC60Q8IWA6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC60Q8IWA6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC60Q8IWA6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 AC092368.3-202ENST00000574180 1591 ntBASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CCDC60Q8IWA6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 PRORSD1P-201ENST00000295112 541 ntBASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 AC026366.1-201ENST00000488803 879 ntBASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 AP003097.1-201ENST00000530657 1135 ntBASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 AC008403.3-201ENST00000598924 454 ntBASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
CCDC60Q8IWA6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC60Q8IWA6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
CCDC60Q8IWA6 PLK5-205ENST00000642079 1969 ntBASIC22.78■■□□□ 1.24
CCDC60Q8IWA6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC60Q8IWA6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC60Q8IWA6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC60Q8IWA6 KRT18P29-201ENST00000397031 1267 ntBASIC22.78■■□□□ 1.24
CCDC60Q8IWA6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
CCDC60Q8IWA6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.78■■□□□ 1.24
CCDC60Q8IWA6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.78■■□□□ 1.24
CCDC60Q8IWA6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.78■■□□□ 1.24
CCDC60Q8IWA6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms